Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30488 | 91687;91688;91689 | chr2:178551069;178551068;178551067 | chr2:179415796;179415795;179415794 |
N2AB | 28847 | 86764;86765;86766 | chr2:178551069;178551068;178551067 | chr2:179415796;179415795;179415794 |
N2A | 27920 | 83983;83984;83985 | chr2:178551069;178551068;178551067 | chr2:179415796;179415795;179415794 |
N2B | 21423 | 64492;64493;64494 | chr2:178551069;178551068;178551067 | chr2:179415796;179415795;179415794 |
Novex-1 | 21548 | 64867;64868;64869 | chr2:178551069;178551068;178551067 | chr2:179415796;179415795;179415794 |
Novex-2 | 21615 | 65068;65069;65070 | chr2:178551069;178551068;178551067 | chr2:179415796;179415795;179415794 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs868503876 | None | 0.896 | N | 0.56 | 0.539 | 0.664074601257 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0625 | likely_benign | 0.0661 | benign | -0.516 | Destabilizing | 0.046 | N | 0.235 | neutral | N | 0.494162253 | None | None | N |
P/C | 0.4886 | ambiguous | 0.5669 | pathogenic | -0.546 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
P/D | 0.6299 | likely_pathogenic | 0.6898 | pathogenic | -0.236 | Destabilizing | 0.976 | D | 0.421 | neutral | None | None | None | None | N |
P/E | 0.3531 | ambiguous | 0.3912 | ambiguous | -0.358 | Destabilizing | 0.976 | D | 0.378 | neutral | None | None | None | None | N |
P/F | 0.4942 | ambiguous | 0.579 | pathogenic | -0.849 | Destabilizing | 0.996 | D | 0.64 | neutral | None | None | None | None | N |
P/G | 0.3069 | likely_benign | 0.3492 | ambiguous | -0.647 | Destabilizing | 0.851 | D | 0.451 | neutral | None | None | None | None | N |
P/H | 0.2576 | likely_benign | 0.3145 | benign | -0.244 | Destabilizing | 0.999 | D | 0.558 | neutral | N | 0.509738975 | None | None | N |
P/I | 0.2881 | likely_benign | 0.3283 | benign | -0.324 | Destabilizing | 0.988 | D | 0.634 | neutral | None | None | None | None | N |
P/K | 0.4612 | ambiguous | 0.5272 | ambiguous | -0.255 | Destabilizing | 0.976 | D | 0.399 | neutral | None | None | None | None | N |
P/L | 0.1433 | likely_benign | 0.1722 | benign | -0.324 | Destabilizing | 0.896 | D | 0.56 | neutral | N | 0.502079199 | None | None | N |
P/M | 0.2847 | likely_benign | 0.3268 | benign | -0.191 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
P/N | 0.3903 | ambiguous | 0.4357 | ambiguous | 0.026 | Stabilizing | 0.976 | D | 0.553 | neutral | None | None | None | None | N |
P/Q | 0.1841 | likely_benign | 0.2136 | benign | -0.272 | Destabilizing | 0.988 | D | 0.448 | neutral | None | None | None | None | N |
P/R | 0.3233 | likely_benign | 0.3887 | ambiguous | 0.265 | Stabilizing | 0.968 | D | 0.569 | neutral | N | 0.518448707 | None | None | N |
P/S | 0.1168 | likely_benign | 0.1338 | benign | -0.376 | Destabilizing | 0.211 | N | 0.245 | neutral | N | 0.494811044 | None | None | N |
P/T | 0.1056 | likely_benign | 0.1174 | benign | -0.398 | Destabilizing | 0.811 | D | 0.429 | neutral | N | 0.513569706 | None | None | N |
P/V | 0.1755 | likely_benign | 0.2051 | benign | -0.353 | Destabilizing | 0.919 | D | 0.469 | neutral | None | None | None | None | N |
P/W | 0.7207 | likely_pathogenic | 0.7883 | pathogenic | -0.9 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
P/Y | 0.4922 | ambiguous | 0.5759 | pathogenic | -0.568 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.