Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3051 | 9376;9377;9378 | chr2:178768685;178768684;178768683 | chr2:179633412;179633411;179633410 |
N2AB | 3051 | 9376;9377;9378 | chr2:178768685;178768684;178768683 | chr2:179633412;179633411;179633410 |
N2A | 3051 | 9376;9377;9378 | chr2:178768685;178768684;178768683 | chr2:179633412;179633411;179633410 |
N2B | 3005 | 9238;9239;9240 | chr2:178768685;178768684;178768683 | chr2:179633412;179633411;179633410 |
Novex-1 | 3005 | 9238;9239;9240 | chr2:178768685;178768684;178768683 | chr2:179633412;179633411;179633410 |
Novex-2 | 3005 | 9238;9239;9240 | chr2:178768685;178768684;178768683 | chr2:179633412;179633411;179633410 |
Novex-3 | 3051 | 9376;9377;9378 | chr2:178768685;178768684;178768683 | chr2:179633412;179633411;179633410 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.999 | D | 0.558 | 0.398 | 0.544389754888 | gnomAD-4.0.0 | 1.59075E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85659E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9809 | likely_pathogenic | 0.965 | pathogenic | -2.731 | Highly Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
L/C | 0.9707 | likely_pathogenic | 0.9574 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -3.367 | Highly Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
L/E | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -3.038 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/F | 0.9801 | likely_pathogenic | 0.9756 | pathogenic | -1.695 | Destabilizing | 1.0 | D | 0.758 | deleterious | D | 0.640075121 | None | None | N |
L/G | 0.9978 | likely_pathogenic | 0.9959 | pathogenic | -3.352 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/H | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -3.092 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.681425978 | None | None | N |
L/I | 0.577 | likely_pathogenic | 0.5231 | ambiguous | -0.861 | Destabilizing | 0.999 | D | 0.559 | neutral | D | 0.633582126 | None | None | N |
L/K | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
L/M | 0.8048 | likely_pathogenic | 0.7724 | pathogenic | -0.936 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
L/N | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -2.729 | Highly Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
L/P | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.784 | deleterious | D | 0.681425978 | None | None | N |
L/Q | 0.9984 | likely_pathogenic | 0.9975 | pathogenic | -2.359 | Highly Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/R | 0.9966 | likely_pathogenic | 0.9957 | pathogenic | -2.106 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.681425978 | None | None | N |
L/S | 0.9986 | likely_pathogenic | 0.9975 | pathogenic | -3.289 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/T | 0.9931 | likely_pathogenic | 0.9882 | pathogenic | -2.79 | Highly Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/V | 0.6099 | likely_pathogenic | 0.5248 | ambiguous | -1.476 | Destabilizing | 0.999 | D | 0.558 | neutral | D | 0.662714747 | None | None | N |
L/W | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -2.114 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/Y | 0.9979 | likely_pathogenic | 0.9976 | pathogenic | -1.878 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.