Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30510 | 91753;91754;91755 | chr2:178551003;178551002;178551001 | chr2:179415730;179415729;179415728 |
N2AB | 28869 | 86830;86831;86832 | chr2:178551003;178551002;178551001 | chr2:179415730;179415729;179415728 |
N2A | 27942 | 84049;84050;84051 | chr2:178551003;178551002;178551001 | chr2:179415730;179415729;179415728 |
N2B | 21445 | 64558;64559;64560 | chr2:178551003;178551002;178551001 | chr2:179415730;179415729;179415728 |
Novex-1 | 21570 | 64933;64934;64935 | chr2:178551003;178551002;178551001 | chr2:179415730;179415729;179415728 |
Novex-2 | 21637 | 65134;65135;65136 | chr2:178551003;178551002;178551001 | chr2:179415730;179415729;179415728 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.905 | N | 0.511 | 0.218 | 0.141422826196 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2051 | likely_benign | 0.1889 | benign | -0.153 | Destabilizing | 0.984 | D | 0.575 | neutral | None | None | None | None | N |
Q/C | 0.7891 | likely_pathogenic | 0.7565 | pathogenic | 0.179 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Q/D | 0.4499 | ambiguous | 0.4351 | ambiguous | 0.006 | Stabilizing | 0.939 | D | 0.492 | neutral | None | None | None | None | N |
Q/E | 0.1085 | likely_benign | 0.1101 | benign | -0.051 | Destabilizing | 0.905 | D | 0.511 | neutral | N | 0.33298098 | None | None | N |
Q/F | 0.7349 | likely_pathogenic | 0.7016 | pathogenic | -0.541 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
Q/G | 0.3438 | ambiguous | 0.3403 | ambiguous | -0.271 | Destabilizing | 0.968 | D | 0.669 | prob.neutral | None | None | None | None | N |
Q/H | 0.298 | likely_benign | 0.2714 | benign | -0.236 | Destabilizing | 0.994 | D | 0.583 | neutral | N | 0.447231992 | None | None | N |
Q/I | 0.3994 | ambiguous | 0.3696 | ambiguous | 0.059 | Stabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
Q/K | 0.1459 | likely_benign | 0.1412 | benign | 0.178 | Stabilizing | 0.958 | D | 0.537 | neutral | N | 0.417639804 | None | None | N |
Q/L | 0.164 | likely_benign | 0.1511 | benign | 0.059 | Stabilizing | 0.979 | D | 0.66 | prob.neutral | N | 0.426318002 | None | None | N |
Q/M | 0.3979 | ambiguous | 0.3753 | ambiguous | 0.328 | Stabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | N |
Q/N | 0.2852 | likely_benign | 0.2541 | benign | -0.076 | Destabilizing | 0.147 | N | 0.254 | neutral | None | None | None | None | N |
Q/P | 0.1315 | likely_benign | 0.1212 | benign | 0.013 | Stabilizing | 0.998 | D | 0.616 | neutral | N | 0.396205739 | None | None | N |
Q/R | 0.1668 | likely_benign | 0.1687 | benign | 0.301 | Stabilizing | 0.979 | D | 0.501 | neutral | N | 0.430819745 | None | None | N |
Q/S | 0.257 | likely_benign | 0.2323 | benign | -0.071 | Destabilizing | 0.968 | D | 0.507 | neutral | None | None | None | None | N |
Q/T | 0.2434 | likely_benign | 0.2249 | benign | 0.005 | Stabilizing | 0.968 | D | 0.525 | neutral | None | None | None | None | N |
Q/V | 0.2455 | likely_benign | 0.2273 | benign | 0.013 | Stabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
Q/W | 0.7566 | likely_pathogenic | 0.7457 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
Q/Y | 0.5476 | ambiguous | 0.514 | ambiguous | -0.283 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.