Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30518 | 91777;91778;91779 | chr2:178550979;178550978;178550977 | chr2:179415706;179415705;179415704 |
N2AB | 28877 | 86854;86855;86856 | chr2:178550979;178550978;178550977 | chr2:179415706;179415705;179415704 |
N2A | 27950 | 84073;84074;84075 | chr2:178550979;178550978;178550977 | chr2:179415706;179415705;179415704 |
N2B | 21453 | 64582;64583;64584 | chr2:178550979;178550978;178550977 | chr2:179415706;179415705;179415704 |
Novex-1 | 21578 | 64957;64958;64959 | chr2:178550979;178550978;178550977 | chr2:179415706;179415705;179415704 |
Novex-2 | 21645 | 65158;65159;65160 | chr2:178550979;178550978;178550977 | chr2:179415706;179415705;179415704 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.958 | N | 0.593 | 0.336 | 0.586816528483 | gnomAD-4.0.0 | 3.18731E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72122E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6172 | likely_pathogenic | 0.6602 | pathogenic | -0.263 | Destabilizing | 0.862 | D | 0.563 | neutral | None | None | None | None | N |
R/C | 0.3054 | likely_benign | 0.3566 | ambiguous | -0.21 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
R/D | 0.8776 | likely_pathogenic | 0.8936 | pathogenic | 0.014 | Stabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | N |
R/E | 0.5746 | likely_pathogenic | 0.6021 | pathogenic | 0.107 | Stabilizing | 0.938 | D | 0.477 | neutral | None | None | None | None | N |
R/F | 0.7681 | likely_pathogenic | 0.8064 | pathogenic | -0.301 | Destabilizing | 0.997 | D | 0.797 | deleterious | None | None | None | None | N |
R/G | 0.499 | ambiguous | 0.5773 | pathogenic | -0.525 | Destabilizing | 0.958 | D | 0.593 | neutral | N | 0.490225913 | None | None | N |
R/H | 0.1666 | likely_benign | 0.184 | benign | -1.013 | Destabilizing | 0.997 | D | 0.433 | neutral | None | None | None | None | N |
R/I | 0.4585 | ambiguous | 0.5126 | ambiguous | 0.416 | Stabilizing | 0.996 | D | 0.831 | deleterious | N | 0.49318886 | None | None | N |
R/K | 0.1106 | likely_benign | 0.1147 | benign | -0.264 | Destabilizing | 0.06 | N | 0.134 | neutral | N | 0.381170076 | None | None | N |
R/L | 0.4378 | ambiguous | 0.4957 | ambiguous | 0.416 | Stabilizing | 0.968 | D | 0.593 | neutral | None | None | None | None | N |
R/M | 0.4569 | ambiguous | 0.5001 | ambiguous | 0.054 | Stabilizing | 0.999 | D | 0.554 | neutral | None | None | None | None | N |
R/N | 0.7717 | likely_pathogenic | 0.8066 | pathogenic | 0.188 | Stabilizing | 0.968 | D | 0.559 | neutral | None | None | None | None | N |
R/P | 0.9537 | likely_pathogenic | 0.9637 | pathogenic | 0.212 | Stabilizing | 0.997 | D | 0.753 | deleterious | None | None | None | None | N |
R/Q | 0.1458 | likely_benign | 0.1573 | benign | 0.027 | Stabilizing | 0.938 | D | 0.586 | neutral | None | None | None | None | N |
R/S | 0.6997 | likely_pathogenic | 0.7401 | pathogenic | -0.36 | Destabilizing | 0.919 | D | 0.527 | neutral | N | 0.504288501 | None | None | N |
R/T | 0.4266 | ambiguous | 0.4653 | ambiguous | -0.107 | Destabilizing | 0.958 | D | 0.639 | neutral | N | 0.496266451 | None | None | N |
R/V | 0.5057 | ambiguous | 0.5395 | ambiguous | 0.212 | Stabilizing | 0.991 | D | 0.636 | neutral | None | None | None | None | N |
R/W | 0.3337 | likely_benign | 0.399 | ambiguous | -0.162 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
R/Y | 0.6212 | likely_pathogenic | 0.6737 | pathogenic | 0.202 | Stabilizing | 0.997 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.