Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3052 | 9379;9380;9381 | chr2:178768682;178768681;178768680 | chr2:179633409;179633408;179633407 |
N2AB | 3052 | 9379;9380;9381 | chr2:178768682;178768681;178768680 | chr2:179633409;179633408;179633407 |
N2A | 3052 | 9379;9380;9381 | chr2:178768682;178768681;178768680 | chr2:179633409;179633408;179633407 |
N2B | 3006 | 9241;9242;9243 | chr2:178768682;178768681;178768680 | chr2:179633409;179633408;179633407 |
Novex-1 | 3006 | 9241;9242;9243 | chr2:178768682;178768681;178768680 | chr2:179633409;179633408;179633407 |
Novex-2 | 3006 | 9241;9242;9243 | chr2:178768682;178768681;178768680 | chr2:179633409;179633408;179633407 |
Novex-3 | 3052 | 9379;9380;9381 | chr2:178768682;178768681;178768680 | chr2:179633409;179633408;179633407 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs763833161 | -0.35 | 0.003 | N | 0.151 | 0.08 | 0.1749357433 | gnomAD-2.1.1 | 3.58E-05 | None | None | None | None | N | None | 0 | 2.31468E-04 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
Y/H | rs763833161 | -0.35 | 0.003 | N | 0.151 | 0.08 | 0.1749357433 | gnomAD-4.0.0 | 1.64183E-05 | None | None | None | None | N | None | 0 | 2.01279E-04 | None | 0 | 0 | None | 0 | 0 | 1.34895E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9038 | likely_pathogenic | 0.8309 | pathogenic | -1.7 | Destabilizing | 0.388 | N | 0.409 | neutral | None | None | None | None | N |
Y/C | 0.5388 | ambiguous | 0.4507 | ambiguous | -0.217 | Destabilizing | 0.975 | D | 0.441 | neutral | N | 0.334453496 | None | None | N |
Y/D | 0.8898 | likely_pathogenic | 0.7743 | pathogenic | -0.012 | Destabilizing | 0.627 | D | 0.447 | neutral | N | 0.343856911 | None | None | N |
Y/E | 0.9548 | likely_pathogenic | 0.9017 | pathogenic | 0.001 | Stabilizing | 0.69 | D | 0.425 | neutral | None | None | None | None | N |
Y/F | 0.0979 | likely_benign | 0.0945 | benign | -0.946 | Destabilizing | 0.001 | N | 0.127 | neutral | N | 0.33888026 | None | None | N |
Y/G | 0.9221 | likely_pathogenic | 0.8578 | pathogenic | -1.958 | Destabilizing | 0.388 | N | 0.427 | neutral | None | None | None | None | N |
Y/H | 0.5196 | ambiguous | 0.2968 | benign | -0.571 | Destabilizing | 0.003 | N | 0.151 | neutral | N | 0.343856911 | None | None | N |
Y/I | 0.7545 | likely_pathogenic | 0.6587 | pathogenic | -0.97 | Destabilizing | 0.241 | N | 0.413 | neutral | None | None | None | None | N |
Y/K | 0.9173 | likely_pathogenic | 0.8403 | pathogenic | -0.414 | Destabilizing | 0.69 | D | 0.433 | neutral | None | None | None | None | N |
Y/L | 0.7161 | likely_pathogenic | 0.6151 | pathogenic | -0.97 | Destabilizing | 0.116 | N | 0.415 | neutral | None | None | None | None | N |
Y/M | 0.8163 | likely_pathogenic | 0.7491 | pathogenic | -0.502 | Destabilizing | 0.818 | D | 0.409 | neutral | None | None | None | None | N |
Y/N | 0.6899 | likely_pathogenic | 0.498 | ambiguous | -0.5 | Destabilizing | 0.627 | D | 0.441 | neutral | N | 0.350423176 | None | None | N |
Y/P | 0.9944 | likely_pathogenic | 0.9894 | pathogenic | -1.2 | Destabilizing | 0.932 | D | 0.454 | neutral | None | None | None | None | N |
Y/Q | 0.9052 | likely_pathogenic | 0.8002 | pathogenic | -0.544 | Destabilizing | 0.69 | D | 0.436 | neutral | None | None | None | None | N |
Y/R | 0.8173 | likely_pathogenic | 0.6893 | pathogenic | 0.068 | Stabilizing | 0.69 | D | 0.462 | neutral | None | None | None | None | N |
Y/S | 0.7464 | likely_pathogenic | 0.5641 | pathogenic | -1.018 | Destabilizing | 0.324 | N | 0.423 | neutral | N | 0.346494136 | None | None | N |
Y/T | 0.8302 | likely_pathogenic | 0.698 | pathogenic | -0.915 | Destabilizing | 0.818 | D | 0.424 | neutral | None | None | None | None | N |
Y/V | 0.6861 | likely_pathogenic | 0.5741 | pathogenic | -1.2 | Destabilizing | 0.241 | N | 0.386 | neutral | None | None | None | None | N |
Y/W | 0.6448 | likely_pathogenic | 0.5802 | pathogenic | -0.777 | Destabilizing | 0.932 | D | 0.441 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.