Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30543 | 91852;91853;91854 | chr2:178550211;178550210;178550209 | chr2:179414938;179414937;179414936 |
N2AB | 28902 | 86929;86930;86931 | chr2:178550211;178550210;178550209 | chr2:179414938;179414937;179414936 |
N2A | 27975 | 84148;84149;84150 | chr2:178550211;178550210;178550209 | chr2:179414938;179414937;179414936 |
N2B | 21478 | 64657;64658;64659 | chr2:178550211;178550210;178550209 | chr2:179414938;179414937;179414936 |
Novex-1 | 21603 | 65032;65033;65034 | chr2:178550211;178550210;178550209 | chr2:179414938;179414937;179414936 |
Novex-2 | 21670 | 65233;65234;65235 | chr2:178550211;178550210;178550209 | chr2:179414938;179414937;179414936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1043582121 | -0.17 | 0.901 | N | 0.523 | 0.284 | 0.186928172975 | gnomAD-4.0.0 | 4.1057E-06 | None | None | None | None | I | None | 0 | 4.47247E-05 | None | 0 | 0 | None | 0 | 0 | 3.59825E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1067 | likely_benign | 0.112 | benign | -0.655 | Destabilizing | 0.587 | D | 0.5 | neutral | None | None | None | None | I |
S/C | 0.129 | likely_benign | 0.1308 | benign | -0.406 | Destabilizing | 0.995 | D | 0.601 | neutral | N | 0.456278453 | None | None | I |
S/D | 0.582 | likely_pathogenic | 0.5978 | pathogenic | 0.204 | Stabilizing | 0.633 | D | 0.471 | neutral | None | None | None | None | I |
S/E | 0.7551 | likely_pathogenic | 0.7546 | pathogenic | 0.233 | Stabilizing | 0.775 | D | 0.458 | neutral | None | None | None | None | I |
S/F | 0.3643 | ambiguous | 0.4074 | ambiguous | -0.784 | Destabilizing | 0.987 | D | 0.647 | neutral | None | None | None | None | I |
S/G | 0.1084 | likely_benign | 0.1147 | benign | -0.929 | Destabilizing | 0.349 | N | 0.517 | neutral | N | 0.455264495 | None | None | I |
S/H | 0.5013 | ambiguous | 0.5272 | ambiguous | -1.249 | Destabilizing | 0.923 | D | 0.582 | neutral | None | None | None | None | I |
S/I | 0.1869 | likely_benign | 0.2022 | benign | -0.029 | Destabilizing | 0.949 | D | 0.648 | neutral | N | 0.473084868 | None | None | I |
S/K | 0.868 | likely_pathogenic | 0.8708 | pathogenic | -0.424 | Destabilizing | 0.633 | D | 0.459 | neutral | None | None | None | None | I |
S/L | 0.1578 | likely_benign | 0.1715 | benign | -0.029 | Destabilizing | 0.875 | D | 0.523 | neutral | None | None | None | None | I |
S/M | 0.212 | likely_benign | 0.2263 | benign | 0.049 | Stabilizing | 0.996 | D | 0.584 | neutral | None | None | None | None | I |
S/N | 0.117 | likely_benign | 0.1228 | benign | -0.469 | Destabilizing | 0.003 | N | 0.189 | neutral | N | 0.442799246 | None | None | I |
S/P | 0.1789 | likely_benign | 0.1927 | benign | -0.203 | Destabilizing | 0.961 | D | 0.567 | neutral | None | None | None | None | I |
S/Q | 0.6691 | likely_pathogenic | 0.6769 | pathogenic | -0.502 | Destabilizing | 0.923 | D | 0.525 | neutral | None | None | None | None | I |
S/R | 0.8499 | likely_pathogenic | 0.8581 | pathogenic | -0.407 | Destabilizing | 0.901 | D | 0.523 | neutral | N | 0.462251799 | None | None | I |
S/T | 0.0942 | likely_benign | 0.0977 | benign | -0.503 | Destabilizing | 0.517 | D | 0.517 | neutral | N | 0.382961509 | None | None | I |
S/V | 0.2118 | likely_benign | 0.2177 | benign | -0.203 | Destabilizing | 0.961 | D | 0.566 | neutral | None | None | None | None | I |
S/W | 0.5625 | ambiguous | 0.5867 | pathogenic | -0.79 | Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | I |
S/Y | 0.3053 | likely_benign | 0.3158 | benign | -0.49 | Destabilizing | 0.987 | D | 0.648 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.