Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30544 | 91855;91856;91857 | chr2:178550208;178550207;178550206 | chr2:179414935;179414934;179414933 |
N2AB | 28903 | 86932;86933;86934 | chr2:178550208;178550207;178550206 | chr2:179414935;179414934;179414933 |
N2A | 27976 | 84151;84152;84153 | chr2:178550208;178550207;178550206 | chr2:179414935;179414934;179414933 |
N2B | 21479 | 64660;64661;64662 | chr2:178550208;178550207;178550206 | chr2:179414935;179414934;179414933 |
Novex-1 | 21604 | 65035;65036;65037 | chr2:178550208;178550207;178550206 | chr2:179414935;179414934;179414933 |
Novex-2 | 21671 | 65236;65237;65238 | chr2:178550208;178550207;178550206 | chr2:179414935;179414934;179414933 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs775973411 | -1.455 | 0.934 | N | 0.661 | 0.152 | 0.37479162749 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/F | rs775973411 | -1.455 | 0.934 | N | 0.661 | 0.152 | 0.37479162749 | gnomAD-4.0.0 | 1.59158E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7272 | likely_pathogenic | 0.7394 | pathogenic | -2.446 | Highly Destabilizing | 0.688 | D | 0.553 | neutral | None | None | None | None | N |
L/C | 0.684 | likely_pathogenic | 0.68 | pathogenic | -1.689 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
L/D | 0.9955 | likely_pathogenic | 0.995 | pathogenic | -2.66 | Highly Destabilizing | 0.991 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/E | 0.9729 | likely_pathogenic | 0.9699 | pathogenic | -2.382 | Highly Destabilizing | 0.991 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/F | 0.2053 | likely_benign | 0.221 | benign | -1.451 | Destabilizing | 0.934 | D | 0.661 | neutral | N | 0.480722916 | None | None | N |
L/G | 0.9493 | likely_pathogenic | 0.9484 | pathogenic | -3.016 | Highly Destabilizing | 0.991 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/H | 0.9042 | likely_pathogenic | 0.896 | pathogenic | -2.408 | Highly Destabilizing | 0.997 | D | 0.673 | neutral | N | 0.479498043 | None | None | N |
L/I | 0.1047 | likely_benign | 0.1062 | benign | -0.774 | Destabilizing | 0.002 | N | 0.171 | neutral | N | 0.38579117 | None | None | N |
L/K | 0.9591 | likely_pathogenic | 0.9531 | pathogenic | -1.947 | Destabilizing | 0.974 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/M | 0.1522 | likely_benign | 0.1538 | benign | -0.732 | Destabilizing | 0.949 | D | 0.635 | neutral | None | None | None | None | N |
L/N | 0.969 | likely_pathogenic | 0.9645 | pathogenic | -2.449 | Highly Destabilizing | 0.991 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/P | 0.9768 | likely_pathogenic | 0.974 | pathogenic | -1.316 | Destabilizing | 0.989 | D | 0.727 | prob.delet. | N | 0.479498043 | None | None | N |
L/Q | 0.876 | likely_pathogenic | 0.8626 | pathogenic | -2.194 | Highly Destabilizing | 0.991 | D | 0.663 | neutral | None | None | None | None | N |
L/R | 0.9261 | likely_pathogenic | 0.9182 | pathogenic | -1.853 | Destabilizing | 0.989 | D | 0.689 | prob.neutral | N | 0.479244553 | None | None | N |
L/S | 0.9139 | likely_pathogenic | 0.9132 | pathogenic | -3.146 | Highly Destabilizing | 0.915 | D | 0.696 | prob.neutral | None | None | None | None | N |
L/T | 0.7659 | likely_pathogenic | 0.7703 | pathogenic | -2.7 | Highly Destabilizing | 0.842 | D | 0.62 | neutral | None | None | None | None | N |
L/V | 0.1175 | likely_benign | 0.1244 | benign | -1.316 | Destabilizing | 0.022 | N | 0.193 | neutral | N | 0.391847564 | None | None | N |
L/W | 0.7721 | likely_pathogenic | 0.7804 | pathogenic | -1.773 | Destabilizing | 0.998 | D | 0.638 | neutral | None | None | None | None | N |
L/Y | 0.7944 | likely_pathogenic | 0.7879 | pathogenic | -1.486 | Destabilizing | 0.991 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.