Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30545 | 91858;91859;91860 | chr2:178550205;178550204;178550203 | chr2:179414932;179414931;179414930 |
N2AB | 28904 | 86935;86936;86937 | chr2:178550205;178550204;178550203 | chr2:179414932;179414931;179414930 |
N2A | 27977 | 84154;84155;84156 | chr2:178550205;178550204;178550203 | chr2:179414932;179414931;179414930 |
N2B | 21480 | 64663;64664;64665 | chr2:178550205;178550204;178550203 | chr2:179414932;179414931;179414930 |
Novex-1 | 21605 | 65038;65039;65040 | chr2:178550205;178550204;178550203 | chr2:179414932;179414931;179414930 |
Novex-2 | 21672 | 65239;65240;65241 | chr2:178550205;178550204;178550203 | chr2:179414932;179414931;179414930 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.011 | N | 0.271 | 0.106 | 0.104622674875 | gnomAD-4.0.0 | 1.20038E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5789 | likely_pathogenic | 0.6231 | pathogenic | -0.627 | Destabilizing | 0.851 | D | 0.597 | neutral | None | None | None | None | I |
R/C | 0.2114 | likely_benign | 0.2341 | benign | -0.717 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
R/D | 0.828 | likely_pathogenic | 0.8513 | pathogenic | 0.097 | Stabilizing | 0.976 | D | 0.613 | neutral | None | None | None | None | I |
R/E | 0.5274 | ambiguous | 0.5669 | pathogenic | 0.241 | Stabilizing | 0.851 | D | 0.587 | neutral | None | None | None | None | I |
R/F | 0.6783 | likely_pathogenic | 0.7076 | pathogenic | -0.422 | Destabilizing | 0.988 | D | 0.666 | neutral | None | None | None | None | I |
R/G | 0.4837 | ambiguous | 0.5285 | ambiguous | -0.931 | Destabilizing | 0.896 | D | 0.58 | neutral | N | 0.508866017 | None | None | I |
R/H | 0.1207 | likely_benign | 0.1326 | benign | -1.204 | Destabilizing | 0.988 | D | 0.614 | neutral | None | None | None | None | I |
R/I | 0.3677 | ambiguous | 0.3942 | ambiguous | 0.185 | Stabilizing | 0.938 | D | 0.654 | neutral | N | 0.460096206 | None | None | I |
R/K | 0.1179 | likely_benign | 0.1319 | benign | -0.492 | Destabilizing | 0.011 | N | 0.271 | neutral | N | 0.474639519 | None | None | I |
R/L | 0.3394 | likely_benign | 0.3677 | ambiguous | 0.185 | Stabilizing | 0.851 | D | 0.6 | neutral | None | None | None | None | I |
R/M | 0.3902 | ambiguous | 0.4221 | ambiguous | -0.36 | Destabilizing | 0.702 | D | 0.483 | neutral | None | None | None | None | I |
R/N | 0.6992 | likely_pathogenic | 0.7427 | pathogenic | -0.25 | Destabilizing | 0.976 | D | 0.585 | neutral | None | None | None | None | I |
R/P | 0.8949 | likely_pathogenic | 0.9105 | pathogenic | -0.065 | Destabilizing | 0.988 | D | 0.648 | neutral | None | None | None | None | I |
R/Q | 0.1286 | likely_benign | 0.1456 | benign | -0.297 | Destabilizing | 0.919 | D | 0.606 | neutral | None | None | None | None | I |
R/S | 0.6421 | likely_pathogenic | 0.6898 | pathogenic | -0.947 | Destabilizing | 0.896 | D | 0.563 | neutral | N | 0.509368168 | None | None | I |
R/T | 0.3708 | ambiguous | 0.4093 | ambiguous | -0.612 | Destabilizing | 0.896 | D | 0.585 | neutral | N | 0.488739393 | None | None | I |
R/V | 0.4275 | ambiguous | 0.4616 | ambiguous | -0.065 | Destabilizing | 0.851 | D | 0.597 | neutral | None | None | None | None | I |
R/W | 0.2591 | likely_benign | 0.2743 | benign | -0.168 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
R/Y | 0.4869 | ambiguous | 0.5222 | ambiguous | 0.13 | Stabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.