Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30549 | 91870;91871;91872 | chr2:178550193;178550192;178550191 | chr2:179414920;179414919;179414918 |
N2AB | 28908 | 86947;86948;86949 | chr2:178550193;178550192;178550191 | chr2:179414920;179414919;179414918 |
N2A | 27981 | 84166;84167;84168 | chr2:178550193;178550192;178550191 | chr2:179414920;179414919;179414918 |
N2B | 21484 | 64675;64676;64677 | chr2:178550193;178550192;178550191 | chr2:179414920;179414919;179414918 |
Novex-1 | 21609 | 65050;65051;65052 | chr2:178550193;178550192;178550191 | chr2:179414920;179414919;179414918 |
Novex-2 | 21676 | 65251;65252;65253 | chr2:178550193;178550192;178550191 | chr2:179414920;179414919;179414918 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.027 | N | 0.476 | 0.072 | 0.246773566709 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1279 | likely_benign | 0.1333 | benign | -0.345 | Destabilizing | 0.001 | N | 0.243 | neutral | None | None | None | None | I |
L/C | 0.4286 | ambiguous | 0.4363 | ambiguous | -0.621 | Destabilizing | 0.824 | D | 0.537 | neutral | None | None | None | None | I |
L/D | 0.4806 | ambiguous | 0.5035 | ambiguous | -0.009 | Destabilizing | 0.081 | N | 0.572 | neutral | None | None | None | None | I |
L/E | 0.2805 | likely_benign | 0.2764 | benign | -0.111 | Destabilizing | 0.081 | N | 0.582 | neutral | None | None | None | None | I |
L/F | 0.1055 | likely_benign | 0.1053 | benign | -0.526 | Destabilizing | None | N | 0.299 | neutral | N | 0.475550036 | None | None | I |
L/G | 0.3565 | ambiguous | 0.3796 | ambiguous | -0.456 | Destabilizing | 0.035 | N | 0.549 | neutral | None | None | None | None | I |
L/H | 0.1467 | likely_benign | 0.149 | benign | 0.106 | Stabilizing | 0.555 | D | 0.564 | neutral | None | None | None | None | I |
L/I | 0.0804 | likely_benign | 0.0811 | benign | -0.186 | Destabilizing | 0.081 | N | 0.447 | neutral | None | None | None | None | I |
L/K | 0.1803 | likely_benign | 0.1787 | benign | -0.158 | Destabilizing | 0.081 | N | 0.573 | neutral | None | None | None | None | I |
L/M | 0.0901 | likely_benign | 0.0888 | benign | -0.363 | Destabilizing | 0.484 | N | 0.518 | neutral | N | 0.475376678 | None | None | I |
L/N | 0.1906 | likely_benign | 0.208 | benign | 0.023 | Stabilizing | 0.002 | N | 0.451 | neutral | None | None | None | None | I |
L/P | 0.5655 | likely_pathogenic | 0.563 | ambiguous | -0.208 | Destabilizing | 0.38 | N | 0.565 | neutral | None | None | None | None | I |
L/Q | 0.1125 | likely_benign | 0.1159 | benign | -0.178 | Destabilizing | 0.38 | N | 0.542 | neutral | None | None | None | None | I |
L/R | 0.1503 | likely_benign | 0.1487 | benign | 0.296 | Stabilizing | 0.38 | N | 0.541 | neutral | None | None | None | None | I |
L/S | 0.1407 | likely_benign | 0.1544 | benign | -0.387 | Destabilizing | None | N | 0.327 | neutral | N | 0.358530864 | None | None | I |
L/T | 0.1188 | likely_benign | 0.1254 | benign | -0.384 | Destabilizing | 0.081 | N | 0.524 | neutral | None | None | None | None | I |
L/V | 0.0745 | likely_benign | 0.0756 | benign | -0.208 | Destabilizing | 0.027 | N | 0.476 | neutral | N | 0.41657909 | None | None | I |
L/W | 0.2415 | likely_benign | 0.2425 | benign | -0.558 | Destabilizing | 0.78 | D | 0.555 | neutral | N | 0.512894916 | None | None | I |
L/Y | 0.2463 | likely_benign | 0.2508 | benign | -0.289 | Destabilizing | 0.235 | N | 0.575 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.