Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30550 | 91873;91874;91875 | chr2:178550190;178550189;178550188 | chr2:179414917;179414916;179414915 |
N2AB | 28909 | 86950;86951;86952 | chr2:178550190;178550189;178550188 | chr2:179414917;179414916;179414915 |
N2A | 27982 | 84169;84170;84171 | chr2:178550190;178550189;178550188 | chr2:179414917;179414916;179414915 |
N2B | 21485 | 64678;64679;64680 | chr2:178550190;178550189;178550188 | chr2:179414917;179414916;179414915 |
Novex-1 | 21610 | 65053;65054;65055 | chr2:178550190;178550189;178550188 | chr2:179414917;179414916;179414915 |
Novex-2 | 21677 | 65254;65255;65256 | chr2:178550190;178550189;178550188 | chr2:179414917;179414916;179414915 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.001 | N | 0.27 | 0.196 | 0.392395365052 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7288 | likely_pathogenic | 0.7246 | pathogenic | -0.718 | Destabilizing | 0.003 | N | 0.265 | neutral | N | 0.503515789 | None | None | I |
V/C | 0.8621 | likely_pathogenic | 0.8678 | pathogenic | -0.704 | Destabilizing | 0.981 | D | 0.693 | prob.neutral | None | None | None | None | I |
V/D | 0.9925 | likely_pathogenic | 0.9908 | pathogenic | -0.178 | Destabilizing | 0.818 | D | 0.769 | deleterious | None | None | None | None | I |
V/E | 0.9728 | likely_pathogenic | 0.9671 | pathogenic | -0.263 | Destabilizing | 0.324 | N | 0.702 | prob.neutral | D | 0.603409786 | None | None | I |
V/F | 0.5122 | ambiguous | 0.5078 | ambiguous | -0.808 | Destabilizing | 0.69 | D | 0.731 | prob.delet. | None | None | None | None | I |
V/G | 0.8606 | likely_pathogenic | 0.851 | pathogenic | -0.909 | Destabilizing | 0.324 | N | 0.707 | prob.neutral | D | 0.577871674 | None | None | I |
V/H | 0.9768 | likely_pathogenic | 0.973 | pathogenic | -0.526 | Destabilizing | 0.981 | D | 0.768 | deleterious | None | None | None | None | I |
V/I | 0.0819 | likely_benign | 0.0848 | benign | -0.348 | Destabilizing | 0.001 | N | 0.27 | neutral | N | 0.479540064 | None | None | I |
V/K | 0.9709 | likely_pathogenic | 0.9642 | pathogenic | -0.525 | Destabilizing | 0.008 | N | 0.447 | neutral | None | None | None | None | I |
V/L | 0.3531 | ambiguous | 0.3608 | ambiguous | -0.348 | Destabilizing | 0.033 | N | 0.475 | neutral | N | 0.519963112 | None | None | I |
V/M | 0.444 | ambiguous | 0.4434 | ambiguous | -0.357 | Destabilizing | 0.69 | D | 0.601 | neutral | None | None | None | None | I |
V/N | 0.9675 | likely_pathogenic | 0.9624 | pathogenic | -0.226 | Destabilizing | 0.818 | D | 0.788 | deleterious | None | None | None | None | I |
V/P | 0.9732 | likely_pathogenic | 0.9712 | pathogenic | -0.435 | Destabilizing | 0.818 | D | 0.741 | deleterious | None | None | None | None | I |
V/Q | 0.9505 | likely_pathogenic | 0.9407 | pathogenic | -0.44 | Destabilizing | 0.69 | D | 0.76 | deleterious | None | None | None | None | I |
V/R | 0.9487 | likely_pathogenic | 0.9383 | pathogenic | -0.073 | Destabilizing | 0.527 | D | 0.767 | deleterious | None | None | None | None | I |
V/S | 0.8898 | likely_pathogenic | 0.8745 | pathogenic | -0.69 | Destabilizing | 0.241 | N | 0.672 | neutral | None | None | None | None | I |
V/T | 0.7619 | likely_pathogenic | 0.7299 | pathogenic | -0.663 | Destabilizing | 0.388 | N | 0.563 | neutral | None | None | None | None | I |
V/W | 0.9736 | likely_pathogenic | 0.974 | pathogenic | -0.892 | Destabilizing | 0.981 | D | 0.767 | deleterious | None | None | None | None | I |
V/Y | 0.9126 | likely_pathogenic | 0.9012 | pathogenic | -0.583 | Destabilizing | 0.818 | D | 0.734 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.