Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30551 | 91876;91877;91878 | chr2:178550187;178550186;178550185 | chr2:179414914;179414913;179414912 |
N2AB | 28910 | 86953;86954;86955 | chr2:178550187;178550186;178550185 | chr2:179414914;179414913;179414912 |
N2A | 27983 | 84172;84173;84174 | chr2:178550187;178550186;178550185 | chr2:179414914;179414913;179414912 |
N2B | 21486 | 64681;64682;64683 | chr2:178550187;178550186;178550185 | chr2:179414914;179414913;179414912 |
Novex-1 | 21611 | 65056;65057;65058 | chr2:178550187;178550186;178550185 | chr2:179414914;179414913;179414912 |
Novex-2 | 21678 | 65257;65258;65259 | chr2:178550187;178550186;178550185 | chr2:179414914;179414913;179414912 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | None | N | 0.113 | 0.096 | 0.149567049428 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Q/R | rs775297990 | 0.326 | None | N | 0.142 | 0.14 | 0.0986583533028 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 1.65728E-04 |
Q/R | rs775297990 | 0.326 | None | N | 0.142 | 0.14 | 0.0986583533028 | gnomAD-4.0.0 | 2.73687E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 0 | 3.3129E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.211 | likely_benign | 0.2236 | benign | -0.067 | Destabilizing | 0.002 | N | 0.187 | neutral | None | None | None | None | I |
Q/C | 0.6385 | likely_pathogenic | 0.6316 | pathogenic | -0.374 | Destabilizing | 0.497 | N | 0.257 | neutral | None | None | None | None | I |
Q/D | 0.4437 | ambiguous | 0.462 | ambiguous | -0.193 | Destabilizing | 0.018 | N | 0.185 | neutral | None | None | None | None | I |
Q/E | 0.1054 | likely_benign | 0.1051 | benign | -0.244 | Destabilizing | 0.003 | N | 0.156 | neutral | N | 0.42104076 | None | None | I |
Q/F | 0.6671 | likely_pathogenic | 0.6794 | pathogenic | -0.537 | Destabilizing | 0.245 | N | 0.345 | neutral | None | None | None | None | I |
Q/G | 0.2946 | likely_benign | 0.3047 | benign | -0.143 | Destabilizing | 0.008 | N | 0.237 | neutral | None | None | None | None | I |
Q/H | 0.1984 | likely_benign | 0.2037 | benign | 0.127 | Stabilizing | 0.196 | N | 0.252 | neutral | N | 0.500485766 | None | None | I |
Q/I | 0.4138 | ambiguous | 0.4194 | ambiguous | 0.036 | Stabilizing | 0.044 | N | 0.395 | neutral | None | None | None | None | I |
Q/K | 0.0996 | likely_benign | 0.0951 | benign | -0.101 | Destabilizing | None | N | 0.113 | neutral | N | 0.440666671 | None | None | I |
Q/L | 0.1514 | likely_benign | 0.1552 | benign | 0.036 | Stabilizing | 0.007 | N | 0.218 | neutral | N | 0.454252044 | None | None | I |
Q/M | 0.3566 | ambiguous | 0.3666 | ambiguous | -0.147 | Destabilizing | 0.497 | N | 0.264 | neutral | None | None | None | None | I |
Q/N | 0.2726 | likely_benign | 0.301 | benign | -0.462 | Destabilizing | 0.018 | N | 0.185 | neutral | None | None | None | None | I |
Q/P | 0.695 | likely_pathogenic | 0.6686 | pathogenic | 0.023 | Stabilizing | 0.065 | N | 0.307 | neutral | D | 0.525440138 | None | None | I |
Q/R | 0.1091 | likely_benign | 0.1057 | benign | 0.107 | Stabilizing | None | N | 0.142 | neutral | N | 0.440456027 | None | None | I |
Q/S | 0.2079 | likely_benign | 0.2206 | benign | -0.413 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | I |
Q/T | 0.1569 | likely_benign | 0.1678 | benign | -0.351 | Destabilizing | None | N | 0.109 | neutral | None | None | None | None | I |
Q/V | 0.2631 | likely_benign | 0.2735 | benign | 0.023 | Stabilizing | 0.009 | N | 0.217 | neutral | None | None | None | None | I |
Q/W | 0.6241 | likely_pathogenic | 0.6195 | pathogenic | -0.652 | Destabilizing | 0.788 | D | 0.265 | neutral | None | None | None | None | I |
Q/Y | 0.459 | ambiguous | 0.4695 | ambiguous | -0.343 | Destabilizing | 0.497 | N | 0.337 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.