Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30567 | 91924;91925;91926 | chr2:178550139;178550138;178550137 | chr2:179414866;179414865;179414864 |
N2AB | 28926 | 87001;87002;87003 | chr2:178550139;178550138;178550137 | chr2:179414866;179414865;179414864 |
N2A | 27999 | 84220;84221;84222 | chr2:178550139;178550138;178550137 | chr2:179414866;179414865;179414864 |
N2B | 21502 | 64729;64730;64731 | chr2:178550139;178550138;178550137 | chr2:179414866;179414865;179414864 |
Novex-1 | 21627 | 65104;65105;65106 | chr2:178550139;178550138;178550137 | chr2:179414866;179414865;179414864 |
Novex-2 | 21694 | 65305;65306;65307 | chr2:178550139;178550138;178550137 | chr2:179414866;179414865;179414864 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1472322542 | -2.775 | 0.822 | N | 0.587 | 0.575 | 0.771135475104 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
I/T | rs1472322542 | -2.775 | 0.822 | N | 0.587 | 0.575 | 0.771135475104 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4166 | ambiguous | 0.4136 | ambiguous | -2.454 | Highly Destabilizing | 0.717 | D | 0.554 | neutral | None | None | None | None | N |
I/C | 0.8311 | likely_pathogenic | 0.811 | pathogenic | -1.593 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
I/D | 0.9598 | likely_pathogenic | 0.9532 | pathogenic | -2.774 | Highly Destabilizing | 0.993 | D | 0.748 | deleterious | None | None | None | None | N |
I/E | 0.8955 | likely_pathogenic | 0.8805 | pathogenic | -2.592 | Highly Destabilizing | 0.978 | D | 0.722 | prob.delet. | None | None | None | None | N |
I/F | 0.2519 | likely_benign | 0.2383 | benign | -1.522 | Destabilizing | 0.942 | D | 0.577 | neutral | N | 0.509044639 | None | None | N |
I/G | 0.8701 | likely_pathogenic | 0.8604 | pathogenic | -2.928 | Highly Destabilizing | 0.978 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/H | 0.8981 | likely_pathogenic | 0.8805 | pathogenic | -2.167 | Highly Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/K | 0.8582 | likely_pathogenic | 0.8387 | pathogenic | -2.084 | Highly Destabilizing | 0.978 | D | 0.72 | prob.delet. | None | None | None | None | N |
I/L | 0.1146 | likely_benign | 0.1049 | benign | -1.106 | Destabilizing | 0.006 | N | 0.231 | neutral | N | 0.447320498 | None | None | N |
I/M | 0.0918 | likely_benign | 0.0851 | benign | -0.887 | Destabilizing | 0.976 | D | 0.591 | neutral | N | 0.492332736 | None | None | N |
I/N | 0.761 | likely_pathogenic | 0.7178 | pathogenic | -2.304 | Highly Destabilizing | 0.99 | D | 0.753 | deleterious | N | 0.517464884 | None | None | N |
I/P | 0.9307 | likely_pathogenic | 0.9368 | pathogenic | -1.536 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
I/Q | 0.8514 | likely_pathogenic | 0.8283 | pathogenic | -2.272 | Highly Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
I/R | 0.7978 | likely_pathogenic | 0.7721 | pathogenic | -1.621 | Destabilizing | 0.978 | D | 0.752 | deleterious | None | None | None | None | N |
I/S | 0.6739 | likely_pathogenic | 0.6396 | pathogenic | -2.915 | Highly Destabilizing | 0.97 | D | 0.656 | neutral | D | 0.526174616 | None | None | N |
I/T | 0.31 | likely_benign | 0.3037 | benign | -2.599 | Highly Destabilizing | 0.822 | D | 0.587 | neutral | N | 0.51976538 | None | None | N |
I/V | 0.0918 | likely_benign | 0.0938 | benign | -1.536 | Destabilizing | 0.025 | N | 0.203 | neutral | N | 0.487191182 | None | None | N |
I/W | 0.8766 | likely_pathogenic | 0.8582 | pathogenic | -1.823 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
I/Y | 0.7501 | likely_pathogenic | 0.7051 | pathogenic | -1.552 | Destabilizing | 0.978 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.