Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30576 | 91951;91952;91953 | chr2:178550112;178550111;178550110 | chr2:179414839;179414838;179414837 |
N2AB | 28935 | 87028;87029;87030 | chr2:178550112;178550111;178550110 | chr2:179414839;179414838;179414837 |
N2A | 28008 | 84247;84248;84249 | chr2:178550112;178550111;178550110 | chr2:179414839;179414838;179414837 |
N2B | 21511 | 64756;64757;64758 | chr2:178550112;178550111;178550110 | chr2:179414839;179414838;179414837 |
Novex-1 | 21636 | 65131;65132;65133 | chr2:178550112;178550111;178550110 | chr2:179414839;179414838;179414837 |
Novex-2 | 21703 | 65332;65333;65334 | chr2:178550112;178550111;178550110 | chr2:179414839;179414838;179414837 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.76 | N | 0.443 | 0.187 | 0.344251166708 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 1.01626E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs1170381961 | None | 0.982 | N | 0.541 | 0.265 | 0.578910049572 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs1170381961 | None | 0.982 | N | 0.541 | 0.265 | 0.578910049572 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | I | None | 2.41488E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1034 | likely_benign | 0.1018 | benign | -0.583 | Destabilizing | 0.76 | D | 0.443 | neutral | N | 0.474261957 | None | None | I |
T/C | 0.4146 | ambiguous | 0.4141 | ambiguous | -0.28 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | I |
T/D | 0.5849 | likely_pathogenic | 0.5951 | pathogenic | -0.102 | Destabilizing | 0.986 | D | 0.575 | neutral | None | None | None | None | I |
T/E | 0.4708 | ambiguous | 0.4718 | ambiguous | -0.169 | Destabilizing | 0.986 | D | 0.58 | neutral | None | None | None | None | I |
T/F | 0.3292 | likely_benign | 0.335 | benign | -1.015 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | I |
T/G | 0.291 | likely_benign | 0.2866 | benign | -0.74 | Destabilizing | 0.91 | D | 0.551 | neutral | None | None | None | None | I |
T/H | 0.291 | likely_benign | 0.298 | benign | -1.099 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
T/I | 0.2157 | likely_benign | 0.2194 | benign | -0.282 | Destabilizing | 0.991 | D | 0.633 | neutral | N | 0.473397952 | None | None | I |
T/K | 0.3148 | likely_benign | 0.3296 | benign | -0.489 | Destabilizing | 0.986 | D | 0.579 | neutral | None | None | None | None | I |
T/L | 0.1406 | likely_benign | 0.1427 | benign | -0.282 | Destabilizing | 0.953 | D | 0.559 | neutral | None | None | None | None | I |
T/M | 0.1036 | likely_benign | 0.1073 | benign | 0.119 | Stabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | I |
T/N | 0.1579 | likely_benign | 0.1547 | benign | -0.283 | Destabilizing | 0.982 | D | 0.541 | neutral | N | 0.504758222 | None | None | I |
T/P | 0.6058 | likely_pathogenic | 0.5941 | pathogenic | -0.353 | Destabilizing | 0.991 | D | 0.632 | neutral | D | 0.527904441 | None | None | I |
T/Q | 0.2919 | likely_benign | 0.298 | benign | -0.576 | Destabilizing | 0.993 | D | 0.635 | neutral | None | None | None | None | I |
T/R | 0.2596 | likely_benign | 0.2697 | benign | -0.172 | Destabilizing | 0.986 | D | 0.631 | neutral | None | None | None | None | I |
T/S | 0.1137 | likely_benign | 0.1139 | benign | -0.509 | Destabilizing | 0.17 | N | 0.235 | neutral | N | 0.439802666 | None | None | I |
T/V | 0.1657 | likely_benign | 0.1661 | benign | -0.353 | Destabilizing | 0.953 | D | 0.515 | neutral | None | None | None | None | I |
T/W | 0.6543 | likely_pathogenic | 0.6718 | pathogenic | -0.956 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
T/Y | 0.3721 | ambiguous | 0.3677 | ambiguous | -0.7 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.