Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30596 | 92011;92012;92013 | chr2:178550052;178550051;178550050 | chr2:179414779;179414778;179414777 |
N2AB | 28955 | 87088;87089;87090 | chr2:178550052;178550051;178550050 | chr2:179414779;179414778;179414777 |
N2A | 28028 | 84307;84308;84309 | chr2:178550052;178550051;178550050 | chr2:179414779;179414778;179414777 |
N2B | 21531 | 64816;64817;64818 | chr2:178550052;178550051;178550050 | chr2:179414779;179414778;179414777 |
Novex-1 | 21656 | 65191;65192;65193 | chr2:178550052;178550051;178550050 | chr2:179414779;179414778;179414777 |
Novex-2 | 21723 | 65392;65393;65394 | chr2:178550052;178550051;178550050 | chr2:179414779;179414778;179414777 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.027 | N | 0.493 | 0.173 | 0.59408574423 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1157 | likely_benign | 0.1316 | benign | -1.616 | Destabilizing | 0.027 | N | 0.493 | neutral | N | 0.500811053 | None | None | N |
V/C | 0.4182 | ambiguous | 0.4495 | ambiguous | -1.049 | Destabilizing | 0.935 | D | 0.509 | neutral | None | None | None | None | N |
V/D | 0.156 | likely_benign | 0.1872 | benign | -1.477 | Destabilizing | 0.38 | N | 0.597 | neutral | None | None | None | None | N |
V/E | 0.1664 | likely_benign | 0.1945 | benign | -1.446 | Destabilizing | 0.317 | N | 0.565 | neutral | N | 0.395433027 | None | None | N |
V/F | 0.0961 | likely_benign | 0.107 | benign | -1.182 | Destabilizing | 0.235 | N | 0.533 | neutral | None | None | None | None | N |
V/G | 0.1465 | likely_benign | 0.1633 | benign | -1.973 | Destabilizing | 0.317 | N | 0.573 | neutral | N | 0.48703591 | None | None | N |
V/H | 0.2706 | likely_benign | 0.3105 | benign | -1.525 | Destabilizing | 0.935 | D | 0.603 | neutral | None | None | None | None | N |
V/I | 0.0562 | likely_benign | 0.0574 | benign | -0.716 | Destabilizing | None | N | 0.201 | neutral | N | 0.452134458 | None | None | N |
V/K | 0.1953 | likely_benign | 0.2206 | benign | -1.225 | Destabilizing | 0.38 | N | 0.565 | neutral | None | None | None | None | N |
V/L | 0.0883 | likely_benign | 0.0903 | benign | -0.716 | Destabilizing | None | N | 0.192 | neutral | N | 0.482014648 | None | None | N |
V/M | 0.0813 | likely_benign | 0.0828 | benign | -0.545 | Destabilizing | 0.235 | N | 0.528 | neutral | None | None | None | None | N |
V/N | 0.0911 | likely_benign | 0.1048 | benign | -1.042 | Destabilizing | 0.38 | N | 0.599 | neutral | None | None | None | None | N |
V/P | 0.3698 | ambiguous | 0.4586 | ambiguous | -0.982 | Destabilizing | 0.555 | D | 0.582 | neutral | None | None | None | None | N |
V/Q | 0.1863 | likely_benign | 0.2068 | benign | -1.185 | Destabilizing | 0.555 | D | 0.591 | neutral | None | None | None | None | N |
V/R | 0.1839 | likely_benign | 0.2077 | benign | -0.762 | Destabilizing | 0.38 | N | 0.601 | neutral | None | None | None | None | N |
V/S | 0.105 | likely_benign | 0.1204 | benign | -1.615 | Destabilizing | 0.081 | N | 0.534 | neutral | None | None | None | None | N |
V/T | 0.0941 | likely_benign | 0.1013 | benign | -1.472 | Destabilizing | 0.002 | N | 0.349 | neutral | None | None | None | None | N |
V/W | 0.5246 | ambiguous | 0.5642 | pathogenic | -1.411 | Destabilizing | 0.935 | D | 0.631 | neutral | None | None | None | None | N |
V/Y | 0.2784 | likely_benign | 0.3013 | benign | -1.111 | Destabilizing | 0.555 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.