Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30601 | 92026;92027;92028 | chr2:178550037;178550036;178550035 | chr2:179414764;179414763;179414762 |
N2AB | 28960 | 87103;87104;87105 | chr2:178550037;178550036;178550035 | chr2:179414764;179414763;179414762 |
N2A | 28033 | 84322;84323;84324 | chr2:178550037;178550036;178550035 | chr2:179414764;179414763;179414762 |
N2B | 21536 | 64831;64832;64833 | chr2:178550037;178550036;178550035 | chr2:179414764;179414763;179414762 |
Novex-1 | 21661 | 65206;65207;65208 | chr2:178550037;178550036;178550035 | chr2:179414764;179414763;179414762 |
Novex-2 | 21728 | 65407;65408;65409 | chr2:178550037;178550036;178550035 | chr2:179414764;179414763;179414762 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | D | 0.729 | 0.751 | 0.67724314777 | gnomAD-4.0.0 | 2.05528E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73792E-04 | 1.80086E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6811 | likely_pathogenic | 0.6641 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/D | 0.996 | likely_pathogenic | 0.9954 | pathogenic | -1.697 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.645733397 | None | None | N |
A/E | 0.99 | likely_pathogenic | 0.9874 | pathogenic | -1.747 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
A/F | 0.9638 | likely_pathogenic | 0.962 | pathogenic | -1.168 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
A/G | 0.2453 | likely_benign | 0.2622 | benign | -1.271 | Destabilizing | 1.0 | D | 0.549 | neutral | D | 0.58102018 | None | None | N |
A/H | 0.9968 | likely_pathogenic | 0.9958 | pathogenic | -1.453 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
A/I | 0.6599 | likely_pathogenic | 0.6618 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
A/K | 0.9978 | likely_pathogenic | 0.997 | pathogenic | -1.414 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
A/L | 0.6102 | likely_pathogenic | 0.5871 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/M | 0.7564 | likely_pathogenic | 0.7456 | pathogenic | -0.381 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/N | 0.9863 | likely_pathogenic | 0.9838 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
A/P | 0.9958 | likely_pathogenic | 0.9958 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.629512231 | None | None | N |
A/Q | 0.9855 | likely_pathogenic | 0.9812 | pathogenic | -1.323 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/R | 0.9939 | likely_pathogenic | 0.9922 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
A/S | 0.3671 | ambiguous | 0.3573 | ambiguous | -1.382 | Destabilizing | 1.0 | D | 0.55 | neutral | D | 0.613089262 | None | None | N |
A/T | 0.4254 | ambiguous | 0.4147 | ambiguous | -1.353 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.644926179 | None | None | N |
A/V | 0.3066 | likely_benign | 0.308 | benign | -0.658 | Destabilizing | 1.0 | D | 0.608 | neutral | N | 0.495111575 | None | None | N |
A/W | 0.9978 | likely_pathogenic | 0.9975 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/Y | 0.9899 | likely_pathogenic | 0.9878 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.