Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30612 | 92059;92060;92061 | chr2:178550004;178550003;178550002 | chr2:179414731;179414730;179414729 |
N2AB | 28971 | 87136;87137;87138 | chr2:178550004;178550003;178550002 | chr2:179414731;179414730;179414729 |
N2A | 28044 | 84355;84356;84357 | chr2:178550004;178550003;178550002 | chr2:179414731;179414730;179414729 |
N2B | 21547 | 64864;64865;64866 | chr2:178550004;178550003;178550002 | chr2:179414731;179414730;179414729 |
Novex-1 | 21672 | 65239;65240;65241 | chr2:178550004;178550003;178550002 | chr2:179414731;179414730;179414729 |
Novex-2 | 21739 | 65440;65441;65442 | chr2:178550004;178550003;178550002 | chr2:179414731;179414730;179414729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs748226847 | -1.018 | None | N | 0.119 | 0.079 | 0.222439326576 | gnomAD-2.1.1 | 8.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
I/V | rs748226847 | -1.018 | None | N | 0.119 | 0.079 | 0.222439326576 | gnomAD-4.0.0 | 4.12034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.41529E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6593 | likely_pathogenic | 0.6703 | pathogenic | -2.022 | Highly Destabilizing | 0.035 | N | 0.615 | neutral | None | None | None | None | N |
I/C | 0.6786 | likely_pathogenic | 0.687 | pathogenic | -1.425 | Destabilizing | 0.824 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/D | 0.9773 | likely_pathogenic | 0.9798 | pathogenic | -1.543 | Destabilizing | 0.555 | D | 0.773 | deleterious | None | None | None | None | N |
I/E | 0.9417 | likely_pathogenic | 0.9457 | pathogenic | -1.327 | Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | N |
I/F | 0.2334 | likely_benign | 0.2547 | benign | -1.031 | Destabilizing | 0.317 | N | 0.713 | prob.delet. | N | 0.404228655 | None | None | N |
I/G | 0.874 | likely_pathogenic | 0.8801 | pathogenic | -2.545 | Highly Destabilizing | 0.555 | D | 0.793 | deleterious | None | None | None | None | N |
I/H | 0.9119 | likely_pathogenic | 0.9203 | pathogenic | -1.741 | Destabilizing | 0.935 | D | 0.736 | prob.delet. | None | None | None | None | N |
I/K | 0.865 | likely_pathogenic | 0.8752 | pathogenic | -1.412 | Destabilizing | 0.555 | D | 0.795 | deleterious | None | None | None | None | N |
I/L | 0.1055 | likely_benign | 0.1137 | benign | -0.541 | Destabilizing | None | N | 0.117 | neutral | N | 0.486841678 | None | None | N |
I/M | 0.094 | likely_benign | 0.1125 | benign | -0.623 | Destabilizing | 0.012 | N | 0.382 | neutral | N | 0.485024901 | None | None | N |
I/N | 0.8016 | likely_pathogenic | 0.8105 | pathogenic | -1.683 | Destabilizing | 0.741 | D | 0.773 | deleterious | N | 0.48553188 | None | None | N |
I/P | 0.9838 | likely_pathogenic | 0.9816 | pathogenic | -1.012 | Destabilizing | 0.791 | D | 0.777 | deleterious | None | None | None | None | N |
I/Q | 0.8721 | likely_pathogenic | 0.8854 | pathogenic | -1.516 | Destabilizing | 0.555 | D | 0.775 | deleterious | None | None | None | None | N |
I/R | 0.8132 | likely_pathogenic | 0.8278 | pathogenic | -1.229 | Destabilizing | 0.555 | D | 0.779 | deleterious | None | None | None | None | N |
I/S | 0.7785 | likely_pathogenic | 0.7842 | pathogenic | -2.476 | Highly Destabilizing | 0.117 | N | 0.747 | deleterious | N | 0.506393018 | None | None | N |
I/T | 0.6568 | likely_pathogenic | 0.6746 | pathogenic | -2.096 | Highly Destabilizing | 0.062 | N | 0.665 | neutral | N | 0.479379775 | None | None | N |
I/V | 0.0977 | likely_benign | 0.0899 | benign | -1.012 | Destabilizing | None | N | 0.119 | neutral | N | 0.41348007 | None | None | N |
I/W | 0.8727 | likely_pathogenic | 0.9027 | pathogenic | -1.242 | Destabilizing | 0.935 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/Y | 0.708 | likely_pathogenic | 0.7282 | pathogenic | -0.961 | Destabilizing | 0.555 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.