Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30619 | 92080;92081;92082 | chr2:178549867;178549866;178549865 | chr2:179414594;179414593;179414592 |
N2AB | 28978 | 87157;87158;87159 | chr2:178549867;178549866;178549865 | chr2:179414594;179414593;179414592 |
N2A | 28051 | 84376;84377;84378 | chr2:178549867;178549866;178549865 | chr2:179414594;179414593;179414592 |
N2B | 21554 | 64885;64886;64887 | chr2:178549867;178549866;178549865 | chr2:179414594;179414593;179414592 |
Novex-1 | 21679 | 65260;65261;65262 | chr2:178549867;178549866;178549865 | chr2:179414594;179414593;179414592 |
Novex-2 | 21746 | 65461;65462;65463 | chr2:178549867;178549866;178549865 | chr2:179414594;179414593;179414592 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1698630177 | None | 0.986 | N | 0.655 | 0.332 | 0.304435445954 | gnomAD-4.0.0 | 3.54985E-06 | None | None | None | None | I | None | 0 | 3.15816E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 1.73058E-05 | 0 |
T/K | None | None | 0.986 | N | 0.567 | 0.387 | 0.281780670237 | gnomAD-4.0.0 | 1.77493E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.73058E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.093 | likely_benign | 0.1142 | benign | -0.722 | Destabilizing | 0.058 | N | 0.155 | neutral | N | 0.455648327 | None | None | I |
T/C | 0.3682 | ambiguous | 0.3893 | ambiguous | -0.343 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
T/D | 0.6862 | likely_pathogenic | 0.7623 | pathogenic | 0.086 | Stabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | I |
T/E | 0.4677 | ambiguous | 0.579 | pathogenic | 0.009 | Stabilizing | 0.989 | D | 0.593 | neutral | None | None | None | None | I |
T/F | 0.3152 | likely_benign | 0.4032 | ambiguous | -1.253 | Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | I |
T/G | 0.3958 | ambiguous | 0.4126 | ambiguous | -0.84 | Destabilizing | 0.929 | D | 0.574 | neutral | None | None | None | None | I |
T/H | 0.3724 | ambiguous | 0.4314 | ambiguous | -1.231 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
T/I | 0.1236 | likely_benign | 0.176 | benign | -0.521 | Destabilizing | 0.986 | D | 0.655 | prob.neutral | N | 0.448242352 | None | None | I |
T/K | 0.2481 | likely_benign | 0.3306 | benign | -0.381 | Destabilizing | 0.986 | D | 0.567 | neutral | N | 0.395234586 | None | None | I |
T/L | 0.1121 | likely_benign | 0.1547 | benign | -0.521 | Destabilizing | 0.963 | D | 0.565 | neutral | None | None | None | None | I |
T/M | 0.0904 | likely_benign | 0.1172 | benign | -0.056 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
T/N | 0.192 | likely_benign | 0.2327 | benign | -0.148 | Destabilizing | 0.995 | D | 0.603 | neutral | None | None | None | None | I |
T/P | 0.1922 | likely_benign | 0.229 | benign | -0.562 | Destabilizing | 0.993 | D | 0.655 | prob.neutral | N | 0.436425061 | None | None | I |
T/Q | 0.2949 | likely_benign | 0.3552 | ambiguous | -0.479 | Destabilizing | 0.995 | D | 0.629 | neutral | None | None | None | None | I |
T/R | 0.2417 | likely_benign | 0.3052 | benign | -0.097 | Destabilizing | 0.993 | D | 0.628 | neutral | N | 0.415417857 | None | None | I |
T/S | 0.1304 | likely_benign | 0.152 | benign | -0.423 | Destabilizing | 0.908 | D | 0.348 | neutral | N | 0.469868417 | None | None | I |
T/V | 0.0963 | likely_benign | 0.1264 | benign | -0.562 | Destabilizing | 0.929 | D | 0.435 | neutral | None | None | None | None | I |
T/W | 0.8001 | likely_pathogenic | 0.8347 | pathogenic | -1.155 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
T/Y | 0.3743 | ambiguous | 0.4183 | ambiguous | -0.902 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.