Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30621 | 92086;92087;92088 | chr2:178549861;178549860;178549859 | chr2:179414588;179414587;179414586 |
N2AB | 28980 | 87163;87164;87165 | chr2:178549861;178549860;178549859 | chr2:179414588;179414587;179414586 |
N2A | 28053 | 84382;84383;84384 | chr2:178549861;178549860;178549859 | chr2:179414588;179414587;179414586 |
N2B | 21556 | 64891;64892;64893 | chr2:178549861;178549860;178549859 | chr2:179414588;179414587;179414586 |
Novex-1 | 21681 | 65266;65267;65268 | chr2:178549861;178549860;178549859 | chr2:179414588;179414587;179414586 |
Novex-2 | 21748 | 65467;65468;65469 | chr2:178549861;178549860;178549859 | chr2:179414588;179414587;179414586 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | N | 0.897 | 0.557 | 0.517268597351 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3143 | likely_benign | 0.3204 | benign | -0.835 | Destabilizing | 0.999 | D | 0.773 | deleterious | N | 0.490434091 | None | None | N |
G/C | 0.622 | likely_pathogenic | 0.6149 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
G/D | 0.6144 | likely_pathogenic | 0.6619 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
G/E | 0.6194 | likely_pathogenic | 0.6762 | pathogenic | -1.546 | Destabilizing | 1.0 | D | 0.897 | deleterious | N | 0.496497251 | None | None | N |
G/F | 0.9404 | likely_pathogenic | 0.9526 | pathogenic | -1.301 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
G/H | 0.8935 | likely_pathogenic | 0.8961 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
G/I | 0.8875 | likely_pathogenic | 0.8972 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
G/K | 0.9118 | likely_pathogenic | 0.9221 | pathogenic | -1.239 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
G/L | 0.8312 | likely_pathogenic | 0.8462 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/M | 0.8803 | likely_pathogenic | 0.8843 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/N | 0.7049 | likely_pathogenic | 0.696 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
G/P | 0.9847 | likely_pathogenic | 0.9901 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
G/Q | 0.7353 | likely_pathogenic | 0.7508 | pathogenic | -1.236 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
G/R | 0.8216 | likely_pathogenic | 0.8455 | pathogenic | -0.87 | Destabilizing | 1.0 | D | 0.889 | deleterious | N | 0.517439116 | None | None | N |
G/S | 0.1869 | likely_benign | 0.1806 | benign | -1.19 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/T | 0.5691 | likely_pathogenic | 0.5648 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
G/V | 0.7792 | likely_pathogenic | 0.7998 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.52980938 | None | None | N |
G/W | 0.8797 | likely_pathogenic | 0.9049 | pathogenic | -1.542 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
G/Y | 0.8944 | likely_pathogenic | 0.9114 | pathogenic | -1.165 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.