Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30624 | 92095;92096;92097 | chr2:178549852;178549851;178549850 | chr2:179414579;179414578;179414577 |
N2AB | 28983 | 87172;87173;87174 | chr2:178549852;178549851;178549850 | chr2:179414579;179414578;179414577 |
N2A | 28056 | 84391;84392;84393 | chr2:178549852;178549851;178549850 | chr2:179414579;179414578;179414577 |
N2B | 21559 | 64900;64901;64902 | chr2:178549852;178549851;178549850 | chr2:179414579;179414578;179414577 |
Novex-1 | 21684 | 65275;65276;65277 | chr2:178549852;178549851;178549850 | chr2:179414579;179414578;179414577 |
Novex-2 | 21751 | 65476;65477;65478 | chr2:178549852;178549851;178549850 | chr2:179414579;179414578;179414577 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs886055231 | None | 0.139 | N | 0.269 | 0.061 | 0.233785782151 | gnomAD-4.0.0 | 2.81307E-06 | None | None | None | None | N | None | 0 | 7.78291E-05 | None | 0 | 0 | None | 0 | 0 | 9.14608E-07 | 0 | 0 |
V/I | rs1474057900 | None | 0.425 | N | 0.315 | 0.114 | 0.227260227426 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1474057900 | None | 0.425 | N | 0.315 | 0.114 | 0.227260227426 | gnomAD-4.0.0 | 6.57151E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.067 | likely_benign | 0.0726 | benign | -1.237 | Destabilizing | 0.139 | N | 0.269 | neutral | N | 0.439950942 | None | None | N |
V/C | 0.4999 | ambiguous | 0.5425 | ambiguous | -0.786 | Destabilizing | 0.995 | D | 0.344 | neutral | None | None | None | None | N |
V/D | 0.2101 | likely_benign | 0.2355 | benign | -0.996 | Destabilizing | 0.002 | N | 0.393 | neutral | N | 0.440991092 | None | None | N |
V/E | 0.155 | likely_benign | 0.168 | benign | -1.018 | Destabilizing | 0.004 | N | 0.257 | neutral | None | None | None | None | N |
V/F | 0.1631 | likely_benign | 0.1835 | benign | -0.966 | Destabilizing | 0.975 | D | 0.395 | neutral | N | 0.499903323 | None | None | N |
V/G | 0.1096 | likely_benign | 0.1141 | benign | -1.521 | Destabilizing | 0.001 | N | 0.358 | neutral | N | 0.481144204 | None | None | N |
V/H | 0.3878 | ambiguous | 0.4224 | ambiguous | -1.027 | Destabilizing | 0.981 | D | 0.44 | neutral | None | None | None | None | N |
V/I | 0.0775 | likely_benign | 0.0817 | benign | -0.573 | Destabilizing | 0.425 | N | 0.315 | neutral | N | 0.469407058 | None | None | N |
V/K | 0.194 | likely_benign | 0.2117 | benign | -1.101 | Destabilizing | 0.495 | N | 0.305 | neutral | None | None | None | None | N |
V/L | 0.1453 | likely_benign | 0.1512 | benign | -0.573 | Destabilizing | 0.425 | N | 0.278 | neutral | N | 0.468713624 | None | None | N |
V/M | 0.119 | likely_benign | 0.1296 | benign | -0.458 | Destabilizing | 0.981 | D | 0.377 | neutral | None | None | None | None | N |
V/N | 0.1735 | likely_benign | 0.1807 | benign | -0.841 | Destabilizing | 0.495 | N | 0.369 | neutral | None | None | None | None | N |
V/P | 0.4466 | ambiguous | 0.4721 | ambiguous | -0.759 | Destabilizing | 0.936 | D | 0.397 | neutral | None | None | None | None | N |
V/Q | 0.1964 | likely_benign | 0.2059 | benign | -1.018 | Destabilizing | 0.704 | D | 0.397 | neutral | None | None | None | None | N |
V/R | 0.1792 | likely_benign | 0.1991 | benign | -0.555 | Destabilizing | 0.704 | D | 0.449 | neutral | None | None | None | None | N |
V/S | 0.0971 | likely_benign | 0.1026 | benign | -1.312 | Destabilizing | 0.329 | N | 0.342 | neutral | None | None | None | None | N |
V/T | 0.0808 | likely_benign | 0.0885 | benign | -1.226 | Destabilizing | 0.013 | N | 0.126 | neutral | None | None | None | None | N |
V/W | 0.7082 | likely_pathogenic | 0.7715 | pathogenic | -1.129 | Destabilizing | 0.995 | D | 0.444 | neutral | None | None | None | None | N |
V/Y | 0.4503 | ambiguous | 0.49 | ambiguous | -0.851 | Destabilizing | 0.981 | D | 0.375 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.