Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3063 | 9412;9413;9414 | chr2:178768132;178768131;178768130 | chr2:179632859;179632858;179632857 |
N2AB | 3063 | 9412;9413;9414 | chr2:178768132;178768131;178768130 | chr2:179632859;179632858;179632857 |
N2A | 3063 | 9412;9413;9414 | chr2:178768132;178768131;178768130 | chr2:179632859;179632858;179632857 |
N2B | 3017 | 9274;9275;9276 | chr2:178768132;178768131;178768130 | chr2:179632859;179632858;179632857 |
Novex-1 | 3017 | 9274;9275;9276 | chr2:178768132;178768131;178768130 | chr2:179632859;179632858;179632857 |
Novex-2 | 3017 | 9274;9275;9276 | chr2:178768132;178768131;178768130 | chr2:179632859;179632858;179632857 |
Novex-3 | 3063 | 9412;9413;9414 | chr2:178768132;178768131;178768130 | chr2:179632859;179632858;179632857 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs1325663861 | None | 0.959 | N | 0.53 | 0.502 | 0.292062946507 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/D | rs1325663861 | None | 0.959 | N | 0.53 | 0.502 | 0.292062946507 | gnomAD-4.0.0 | 6.57652E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
H/R | rs762023362 | -0.619 | 0.828 | N | 0.446 | 0.489 | 0.235664433957 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs762023362 | -0.619 | 0.828 | N | 0.446 | 0.489 | 0.235664433957 | gnomAD-4.0.0 | 2.73642E-06 | None | None | None | None | N | None | 0 | 2.23654E-05 | None | 0 | 0 | None | 0 | 0 | 2.6979E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7231 | likely_pathogenic | 0.6478 | pathogenic | -0.516 | Destabilizing | 0.927 | D | 0.487 | neutral | None | None | None | None | N |
H/C | 0.6941 | likely_pathogenic | 0.6241 | pathogenic | 0.234 | Stabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | N |
H/D | 0.622 | likely_pathogenic | 0.5596 | ambiguous | -0.101 | Destabilizing | 0.959 | D | 0.53 | neutral | N | 0.485117775 | None | None | N |
H/E | 0.7717 | likely_pathogenic | 0.7037 | pathogenic | -0.01 | Destabilizing | 0.864 | D | 0.356 | neutral | None | None | None | None | N |
H/F | 0.7524 | likely_pathogenic | 0.6875 | pathogenic | 0.694 | Stabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
H/G | 0.7344 | likely_pathogenic | 0.6494 | pathogenic | -0.875 | Destabilizing | 0.984 | D | 0.561 | neutral | None | None | None | None | N |
H/I | 0.8892 | likely_pathogenic | 0.8522 | pathogenic | 0.46 | Stabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
H/K | 0.6474 | likely_pathogenic | 0.5694 | pathogenic | -0.24 | Destabilizing | 0.148 | N | 0.223 | neutral | None | None | None | None | N |
H/L | 0.4908 | ambiguous | 0.4085 | ambiguous | 0.46 | Stabilizing | 0.979 | D | 0.588 | neutral | N | 0.499719629 | None | None | N |
H/M | 0.8476 | likely_pathogenic | 0.8126 | pathogenic | 0.247 | Stabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
H/N | 0.2677 | likely_benign | 0.2409 | benign | -0.359 | Destabilizing | 0.979 | D | 0.46 | neutral | N | 0.499174197 | None | None | N |
H/P | 0.2244 | likely_benign | 0.1824 | benign | 0.157 | Stabilizing | 0.993 | D | 0.605 | neutral | N | 0.421326116 | None | None | N |
H/Q | 0.5952 | likely_pathogenic | 0.5034 | ambiguous | -0.153 | Destabilizing | 0.476 | N | 0.173 | neutral | N | 0.469658452 | None | None | N |
H/R | 0.456 | ambiguous | 0.3603 | ambiguous | -0.718 | Destabilizing | 0.828 | D | 0.446 | neutral | N | 0.455966152 | None | None | N |
H/S | 0.6424 | likely_pathogenic | 0.5749 | pathogenic | -0.438 | Destabilizing | 0.927 | D | 0.518 | neutral | None | None | None | None | N |
H/T | 0.7419 | likely_pathogenic | 0.7031 | pathogenic | -0.237 | Destabilizing | 0.984 | D | 0.568 | neutral | None | None | None | None | N |
H/V | 0.8298 | likely_pathogenic | 0.7807 | pathogenic | 0.157 | Stabilizing | 0.984 | D | 0.608 | neutral | None | None | None | None | N |
H/W | 0.8547 | likely_pathogenic | 0.8062 | pathogenic | 1.012 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
H/Y | 0.3843 | ambiguous | 0.3024 | benign | 1.092 | Stabilizing | 0.993 | D | 0.47 | neutral | D | 0.575434902 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.