Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3065 | 9418;9419;9420 | chr2:178768126;178768125;178768124 | chr2:179632853;179632852;179632851 |
N2AB | 3065 | 9418;9419;9420 | chr2:178768126;178768125;178768124 | chr2:179632853;179632852;179632851 |
N2A | 3065 | 9418;9419;9420 | chr2:178768126;178768125;178768124 | chr2:179632853;179632852;179632851 |
N2B | 3019 | 9280;9281;9282 | chr2:178768126;178768125;178768124 | chr2:179632853;179632852;179632851 |
Novex-1 | 3019 | 9280;9281;9282 | chr2:178768126;178768125;178768124 | chr2:179632853;179632852;179632851 |
Novex-2 | 3019 | 9280;9281;9282 | chr2:178768126;178768125;178768124 | chr2:179632853;179632852;179632851 |
Novex-3 | 3065 | 9418;9419;9420 | chr2:178768126;178768125;178768124 | chr2:179632853;179632852;179632851 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 1.0 | N | 0.771 | 0.506 | 0.339793275041 | gnomAD-4.0.0 | 3.18139E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71311E-06 | 0 | 0 |
K/T | rs747328944 | -0.279 | 1.0 | N | 0.755 | 0.613 | 0.600719443016 | gnomAD-2.1.1 | 1.99E-05 | None | None | None | None | I | None | 0 | 1.44709E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/T | rs747328944 | -0.279 | 1.0 | N | 0.755 | 0.613 | 0.600719443016 | gnomAD-4.0.0 | 7.95342E-06 | None | None | None | None | I | None | 0 | 1.14338E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8673 | likely_pathogenic | 0.845 | pathogenic | -0.114 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
K/C | 0.9665 | likely_pathogenic | 0.9601 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
K/D | 0.9334 | likely_pathogenic | 0.9301 | pathogenic | 0.003 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
K/E | 0.6627 | likely_pathogenic | 0.6156 | pathogenic | 0.057 | Stabilizing | 0.999 | D | 0.633 | neutral | N | 0.5081668 | None | None | I |
K/F | 0.9888 | likely_pathogenic | 0.9889 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
K/G | 0.8854 | likely_pathogenic | 0.8635 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
K/H | 0.7087 | likely_pathogenic | 0.7023 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/I | 0.9353 | likely_pathogenic | 0.9299 | pathogenic | 0.491 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
K/L | 0.8883 | likely_pathogenic | 0.8851 | pathogenic | 0.491 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
K/M | 0.8473 | likely_pathogenic | 0.8288 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | D | 0.640324919 | None | None | I |
K/N | 0.8854 | likely_pathogenic | 0.8772 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.538681203 | None | None | I |
K/P | 0.9521 | likely_pathogenic | 0.9586 | pathogenic | 0.318 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
K/Q | 0.4369 | ambiguous | 0.3964 | ambiguous | -0.16 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.502495203 | None | None | I |
K/R | 0.1229 | likely_benign | 0.1258 | benign | -0.188 | Destabilizing | 0.999 | D | 0.593 | neutral | N | 0.513619685 | None | None | I |
K/S | 0.8664 | likely_pathogenic | 0.8429 | pathogenic | -0.565 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/T | 0.6656 | likely_pathogenic | 0.6196 | pathogenic | -0.342 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.517143702 | None | None | I |
K/V | 0.8902 | likely_pathogenic | 0.8821 | pathogenic | 0.318 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
K/W | 0.9746 | likely_pathogenic | 0.9719 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
K/Y | 0.9671 | likely_pathogenic | 0.9671 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.