Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30651 | 92176;92177;92178 | chr2:178549771;178549770;178549769 | chr2:179414498;179414497;179414496 |
N2AB | 29010 | 87253;87254;87255 | chr2:178549771;178549770;178549769 | chr2:179414498;179414497;179414496 |
N2A | 28083 | 84472;84473;84474 | chr2:178549771;178549770;178549769 | chr2:179414498;179414497;179414496 |
N2B | 21586 | 64981;64982;64983 | chr2:178549771;178549770;178549769 | chr2:179414498;179414497;179414496 |
Novex-1 | 21711 | 65356;65357;65358 | chr2:178549771;178549770;178549769 | chr2:179414498;179414497;179414496 |
Novex-2 | 21778 | 65557;65558;65559 | chr2:178549771;178549770;178549769 | chr2:179414498;179414497;179414496 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.002 | N | 0.155 | 0.324 | 0.524894780827 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
P/S | rs927540266 | None | 0.01 | N | 0.12 | 0.168 | 0.166414681773 | gnomAD-4.0.0 | 6.16099E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73671E-04 | 7.1995E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0628 | likely_benign | 0.0628 | benign | -0.66 | Destabilizing | 0.001 | N | 0.122 | neutral | N | 0.501205337 | None | None | I |
P/C | 0.4509 | ambiguous | 0.4399 | ambiguous | -0.574 | Destabilizing | 0.981 | D | 0.489 | neutral | None | None | None | None | I |
P/D | 0.248 | likely_benign | 0.2861 | benign | -0.451 | Destabilizing | 0.704 | D | 0.465 | neutral | None | None | None | None | I |
P/E | 0.1755 | likely_benign | 0.1972 | benign | -0.561 | Destabilizing | 0.495 | N | 0.451 | neutral | None | None | None | None | I |
P/F | 0.4732 | ambiguous | 0.4749 | ambiguous | -0.86 | Destabilizing | 0.893 | D | 0.504 | neutral | None | None | None | None | I |
P/G | 0.2444 | likely_benign | 0.2451 | benign | -0.821 | Destabilizing | 0.329 | N | 0.465 | neutral | None | None | None | None | I |
P/H | 0.1803 | likely_benign | 0.1811 | benign | -0.412 | Destabilizing | 0.975 | D | 0.477 | neutral | N | 0.501264326 | None | None | I |
P/I | 0.2742 | likely_benign | 0.2626 | benign | -0.38 | Destabilizing | 0.543 | D | 0.549 | neutral | None | None | None | None | I |
P/K | 0.2117 | likely_benign | 0.2058 | benign | -0.529 | Destabilizing | 0.495 | N | 0.452 | neutral | None | None | None | None | I |
P/L | 0.1168 | likely_benign | 0.1146 | benign | -0.38 | Destabilizing | 0.002 | N | 0.155 | neutral | N | 0.50581023 | None | None | I |
P/M | 0.258 | likely_benign | 0.2455 | benign | -0.287 | Destabilizing | 0.893 | D | 0.478 | neutral | None | None | None | None | I |
P/N | 0.2022 | likely_benign | 0.2115 | benign | -0.216 | Destabilizing | 0.704 | D | 0.497 | neutral | None | None | None | None | I |
P/Q | 0.1301 | likely_benign | 0.1256 | benign | -0.486 | Destabilizing | 0.828 | D | 0.491 | neutral | None | None | None | None | I |
P/R | 0.1784 | likely_benign | 0.1733 | benign | 0.023 | Stabilizing | 0.642 | D | 0.535 | neutral | D | 0.526045066 | None | None | I |
P/S | 0.0992 | likely_benign | 0.0995 | benign | -0.597 | Destabilizing | 0.01 | N | 0.12 | neutral | N | 0.519521739 | None | None | I |
P/T | 0.0904 | likely_benign | 0.089 | benign | -0.605 | Destabilizing | 0.01 | N | 0.12 | neutral | N | 0.472435649 | None | None | I |
P/V | 0.1711 | likely_benign | 0.1661 | benign | -0.438 | Destabilizing | 0.329 | N | 0.464 | neutral | None | None | None | None | I |
P/W | 0.647 | likely_pathogenic | 0.6444 | pathogenic | -0.94 | Destabilizing | 0.995 | D | 0.473 | neutral | None | None | None | None | I |
P/Y | 0.4164 | ambiguous | 0.4193 | ambiguous | -0.638 | Destabilizing | 0.981 | D | 0.509 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.