Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30658 | 92197;92198;92199 | chr2:178549750;178549749;178549748 | chr2:179414477;179414476;179414475 |
N2AB | 29017 | 87274;87275;87276 | chr2:178549750;178549749;178549748 | chr2:179414477;179414476;179414475 |
N2A | 28090 | 84493;84494;84495 | chr2:178549750;178549749;178549748 | chr2:179414477;179414476;179414475 |
N2B | 21593 | 65002;65003;65004 | chr2:178549750;178549749;178549748 | chr2:179414477;179414476;179414475 |
Novex-1 | 21718 | 65377;65378;65379 | chr2:178549750;178549749;178549748 | chr2:179414477;179414476;179414475 |
Novex-2 | 21785 | 65578;65579;65580 | chr2:178549750;178549749;178549748 | chr2:179414477;179414476;179414475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1240970665 | -1.609 | 0.999 | N | 0.645 | 0.353 | 0.231231049324 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs1240970665 | -1.609 | 0.999 | N | 0.645 | 0.353 | 0.231231049324 | gnomAD-4.0.0 | 1.59142E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8365 | likely_pathogenic | 0.857 | pathogenic | -1.164 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | D | 0.538976866 | None | None | N |
E/C | 0.9854 | likely_pathogenic | 0.9871 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/D | 0.8222 | likely_pathogenic | 0.8436 | pathogenic | -1.56 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.50400935 | None | None | N |
E/F | 0.99 | likely_pathogenic | 0.9927 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
E/G | 0.8673 | likely_pathogenic | 0.8829 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.77 | deleterious | D | 0.540751292 | None | None | N |
E/H | 0.9441 | likely_pathogenic | 0.95 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/I | 0.9815 | likely_pathogenic | 0.9843 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
E/K | 0.8671 | likely_pathogenic | 0.8817 | pathogenic | -1.143 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | D | 0.549230308 | None | None | N |
E/L | 0.9653 | likely_pathogenic | 0.9709 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/M | 0.9567 | likely_pathogenic | 0.9632 | pathogenic | 0.698 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/N | 0.9512 | likely_pathogenic | 0.9579 | pathogenic | -1.453 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
E/P | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/Q | 0.3487 | ambiguous | 0.3818 | ambiguous | -1.164 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.470216696 | None | None | N |
E/R | 0.9009 | likely_pathogenic | 0.9123 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/S | 0.8123 | likely_pathogenic | 0.8261 | pathogenic | -2.054 | Highly Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
E/T | 0.9357 | likely_pathogenic | 0.9407 | pathogenic | -1.665 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/V | 0.9446 | likely_pathogenic | 0.9533 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.533153969 | None | None | N |
E/W | 0.9937 | likely_pathogenic | 0.9952 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/Y | 0.9813 | likely_pathogenic | 0.9852 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.