Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30663 | 92212;92213;92214 | chr2:178549735;178549734;178549733 | chr2:179414462;179414461;179414460 |
N2AB | 29022 | 87289;87290;87291 | chr2:178549735;178549734;178549733 | chr2:179414462;179414461;179414460 |
N2A | 28095 | 84508;84509;84510 | chr2:178549735;178549734;178549733 | chr2:179414462;179414461;179414460 |
N2B | 21598 | 65017;65018;65019 | chr2:178549735;178549734;178549733 | chr2:179414462;179414461;179414460 |
Novex-1 | 21723 | 65392;65393;65394 | chr2:178549735;178549734;178549733 | chr2:179414462;179414461;179414460 |
Novex-2 | 21790 | 65593;65594;65595 | chr2:178549735;178549734;178549733 | chr2:179414462;179414461;179414460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1418513895 | 0.054 | 1.0 | N | 0.585 | 0.495 | 0.410734915765 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3008 | likely_benign | 0.3243 | benign | -0.153 | Destabilizing | 0.998 | D | 0.419 | neutral | None | None | None | None | N |
S/C | 0.5639 | ambiguous | 0.6113 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.652 | neutral | N | 0.513630909 | None | None | N |
S/D | 0.9417 | likely_pathogenic | 0.9404 | pathogenic | 0.051 | Stabilizing | 0.999 | D | 0.491 | neutral | None | None | None | None | N |
S/E | 0.9593 | likely_pathogenic | 0.9555 | pathogenic | -0.057 | Destabilizing | 0.999 | D | 0.483 | neutral | None | None | None | None | N |
S/F | 0.8855 | likely_pathogenic | 0.9103 | pathogenic | -0.847 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/G | 0.328 | likely_benign | 0.3729 | ambiguous | -0.213 | Destabilizing | 0.999 | D | 0.418 | neutral | N | 0.49258028 | None | None | N |
S/H | 0.8808 | likely_pathogenic | 0.876 | pathogenic | -0.565 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
S/I | 0.8529 | likely_pathogenic | 0.8767 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.513377419 | None | None | N |
S/K | 0.9826 | likely_pathogenic | 0.98 | pathogenic | -0.426 | Destabilizing | 0.999 | D | 0.483 | neutral | None | None | None | None | N |
S/L | 0.5001 | ambiguous | 0.5865 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.567 | neutral | None | None | None | None | N |
S/M | 0.7181 | likely_pathogenic | 0.7761 | pathogenic | -0.098 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
S/N | 0.6646 | likely_pathogenic | 0.7151 | pathogenic | -0.181 | Destabilizing | 0.999 | D | 0.471 | neutral | N | 0.50864581 | None | None | N |
S/P | 0.9396 | likely_pathogenic | 0.9377 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
S/Q | 0.9167 | likely_pathogenic | 0.9153 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | N |
S/R | 0.9704 | likely_pathogenic | 0.9703 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.585 | neutral | N | 0.477116003 | None | None | N |
S/T | 0.245 | likely_benign | 0.3127 | benign | -0.29 | Destabilizing | 0.999 | D | 0.408 | neutral | N | 0.508283238 | None | None | N |
S/V | 0.7752 | likely_pathogenic | 0.8112 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
S/W | 0.9088 | likely_pathogenic | 0.9181 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
S/Y | 0.8434 | likely_pathogenic | 0.8698 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.