Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30665 | 92218;92219;92220 | chr2:178549729;178549728;178549727 | chr2:179414456;179414455;179414454 |
N2AB | 29024 | 87295;87296;87297 | chr2:178549729;178549728;178549727 | chr2:179414456;179414455;179414454 |
N2A | 28097 | 84514;84515;84516 | chr2:178549729;178549728;178549727 | chr2:179414456;179414455;179414454 |
N2B | 21600 | 65023;65024;65025 | chr2:178549729;178549728;178549727 | chr2:179414456;179414455;179414454 |
Novex-1 | 21725 | 65398;65399;65400 | chr2:178549729;178549728;178549727 | chr2:179414456;179414455;179414454 |
Novex-2 | 21792 | 65599;65600;65601 | chr2:178549729;178549728;178549727 | chr2:179414456;179414455;179414454 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1412840625 | None | 0.995 | N | 0.553 | 0.557 | 0.818544703288 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs1412840625 | None | 0.995 | N | 0.553 | 0.557 | 0.818544703288 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46981E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6554 | likely_pathogenic | 0.6671 | pathogenic | -0.447 | Destabilizing | 0.702 | D | 0.469 | neutral | None | None | None | None | I |
L/C | 0.8989 | likely_pathogenic | 0.91 | pathogenic | -0.857 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | I |
L/D | 0.9638 | likely_pathogenic | 0.9612 | pathogenic | -0.155 | Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | I |
L/E | 0.8477 | likely_pathogenic | 0.8367 | pathogenic | -0.241 | Destabilizing | 0.988 | D | 0.543 | neutral | None | None | None | None | I |
L/F | 0.5043 | ambiguous | 0.5683 | pathogenic | -0.607 | Destabilizing | 0.968 | D | 0.487 | neutral | N | 0.499107825 | None | None | I |
L/G | 0.8928 | likely_pathogenic | 0.9009 | pathogenic | -0.534 | Destabilizing | 0.988 | D | 0.531 | neutral | None | None | None | None | I |
L/H | 0.7658 | likely_pathogenic | 0.7858 | pathogenic | 0.097 | Stabilizing | 0.999 | D | 0.561 | neutral | N | 0.492106386 | None | None | I |
L/I | 0.1591 | likely_benign | 0.1701 | benign | -0.334 | Destabilizing | 0.011 | N | 0.155 | neutral | N | 0.475559067 | None | None | I |
L/K | 0.7379 | likely_pathogenic | 0.7137 | pathogenic | -0.347 | Destabilizing | 0.988 | D | 0.519 | neutral | None | None | None | None | I |
L/M | 0.235 | likely_benign | 0.2413 | benign | -0.655 | Destabilizing | 0.976 | D | 0.499 | neutral | None | None | None | None | I |
L/N | 0.8226 | likely_pathogenic | 0.8057 | pathogenic | -0.235 | Destabilizing | 0.996 | D | 0.556 | neutral | None | None | None | None | I |
L/P | 0.6581 | likely_pathogenic | 0.6896 | pathogenic | -0.346 | Destabilizing | 0.995 | D | 0.553 | neutral | N | 0.521788466 | None | None | I |
L/Q | 0.6041 | likely_pathogenic | 0.6032 | pathogenic | -0.388 | Destabilizing | 0.996 | D | 0.55 | neutral | None | None | None | None | I |
L/R | 0.6641 | likely_pathogenic | 0.6632 | pathogenic | 0.076 | Stabilizing | 0.984 | D | 0.545 | neutral | N | 0.509456674 | None | None | I |
L/S | 0.8213 | likely_pathogenic | 0.8308 | pathogenic | -0.629 | Destabilizing | 0.988 | D | 0.479 | neutral | None | None | None | None | I |
L/T | 0.6629 | likely_pathogenic | 0.6432 | pathogenic | -0.618 | Destabilizing | 0.919 | D | 0.469 | neutral | None | None | None | None | I |
L/V | 0.1811 | likely_benign | 0.2013 | benign | -0.346 | Destabilizing | 0.011 | N | 0.161 | neutral | N | 0.494833938 | None | None | I |
L/W | 0.7392 | likely_pathogenic | 0.7749 | pathogenic | -0.622 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | I |
L/Y | 0.7978 | likely_pathogenic | 0.8143 | pathogenic | -0.401 | Destabilizing | 0.988 | D | 0.517 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.