Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30668 | 92227;92228;92229 | chr2:178549720;178549719;178549718 | chr2:179414447;179414446;179414445 |
N2AB | 29027 | 87304;87305;87306 | chr2:178549720;178549719;178549718 | chr2:179414447;179414446;179414445 |
N2A | 28100 | 84523;84524;84525 | chr2:178549720;178549719;178549718 | chr2:179414447;179414446;179414445 |
N2B | 21603 | 65032;65033;65034 | chr2:178549720;178549719;178549718 | chr2:179414447;179414446;179414445 |
Novex-1 | 21728 | 65407;65408;65409 | chr2:178549720;178549719;178549718 | chr2:179414447;179414446;179414445 |
Novex-2 | 21795 | 65608;65609;65610 | chr2:178549720;178549719;178549718 | chr2:179414447;179414446;179414445 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.669 | 0.359 | 0.290962096972 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85863E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7307 | likely_pathogenic | 0.733 | pathogenic | -0.697 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/D | 0.885 | likely_pathogenic | 0.8992 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
A/E | 0.841 | likely_pathogenic | 0.8534 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.46041472 | None | None | N |
A/F | 0.6562 | likely_pathogenic | 0.715 | pathogenic | -0.767 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
A/G | 0.3387 | likely_benign | 0.3718 | ambiguous | -0.842 | Destabilizing | 1.0 | D | 0.568 | neutral | N | 0.498106317 | None | None | N |
A/H | 0.8286 | likely_pathogenic | 0.8187 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
A/I | 0.5227 | ambiguous | 0.5463 | ambiguous | -0.23 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
A/K | 0.9231 | likely_pathogenic | 0.9248 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
A/L | 0.4136 | ambiguous | 0.429 | ambiguous | -0.23 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
A/M | 0.4027 | ambiguous | 0.4235 | ambiguous | -0.296 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
A/N | 0.5513 | ambiguous | 0.5463 | ambiguous | -0.769 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/P | 0.9526 | likely_pathogenic | 0.9556 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.522540614 | None | None | N |
A/Q | 0.715 | likely_pathogenic | 0.7027 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
A/R | 0.881 | likely_pathogenic | 0.8788 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
A/S | 0.1509 | likely_benign | 0.1535 | benign | -1.079 | Destabilizing | 1.0 | D | 0.557 | neutral | N | 0.427571583 | None | None | N |
A/T | 0.1663 | likely_benign | 0.1891 | benign | -1.032 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.349110799 | None | None | N |
A/V | 0.2546 | likely_benign | 0.2826 | benign | -0.324 | Destabilizing | 1.0 | D | 0.616 | neutral | N | 0.397518035 | None | None | N |
A/W | 0.9565 | likely_pathogenic | 0.9596 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
A/Y | 0.8065 | likely_pathogenic | 0.8152 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.