Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30671 | 92236;92237;92238 | chr2:178549711;178549710;178549709 | chr2:179414438;179414437;179414436 |
N2AB | 29030 | 87313;87314;87315 | chr2:178549711;178549710;178549709 | chr2:179414438;179414437;179414436 |
N2A | 28103 | 84532;84533;84534 | chr2:178549711;178549710;178549709 | chr2:179414438;179414437;179414436 |
N2B | 21606 | 65041;65042;65043 | chr2:178549711;178549710;178549709 | chr2:179414438;179414437;179414436 |
Novex-1 | 21731 | 65416;65417;65418 | chr2:178549711;178549710;178549709 | chr2:179414438;179414437;179414436 |
Novex-2 | 21798 | 65617;65618;65619 | chr2:178549711;178549710;178549709 | chr2:179414438;179414437;179414436 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.012 | N | 0.117 | 0.049 | 0.0482279557977 | gnomAD-4.0.0 | 6.84238E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99497E-07 | 0 | 0 |
E/K | None | None | 0.801 | N | 0.365 | 0.207 | 0.28297238246 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1499 | likely_benign | 0.1559 | benign | -0.265 | Destabilizing | 0.454 | N | 0.423 | neutral | N | 0.424512635 | None | None | I |
E/C | 0.808 | likely_pathogenic | 0.8187 | pathogenic | -0.133 | Destabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | I |
E/D | 0.172 | likely_benign | 0.1957 | benign | -1.154 | Destabilizing | 0.012 | N | 0.117 | neutral | N | 0.430283814 | None | None | I |
E/F | 0.8738 | likely_pathogenic | 0.9053 | pathogenic | 0.594 | Stabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | I |
E/G | 0.2424 | likely_benign | 0.2785 | benign | -0.713 | Destabilizing | 0.625 | D | 0.422 | neutral | N | 0.447658853 | None | None | I |
E/H | 0.5381 | ambiguous | 0.5832 | pathogenic | 0.347 | Stabilizing | 0.974 | D | 0.463 | neutral | None | None | None | None | I |
E/I | 0.607 | likely_pathogenic | 0.6616 | pathogenic | 0.973 | Stabilizing | 0.949 | D | 0.563 | neutral | None | None | None | None | I |
E/K | 0.2248 | likely_benign | 0.2738 | benign | -0.273 | Destabilizing | 0.801 | D | 0.365 | neutral | N | 0.49233235 | None | None | I |
E/L | 0.5943 | likely_pathogenic | 0.6404 | pathogenic | 0.973 | Stabilizing | 0.842 | D | 0.484 | neutral | None | None | None | None | I |
E/M | 0.5835 | likely_pathogenic | 0.6152 | pathogenic | 1.339 | Stabilizing | 0.998 | D | 0.513 | neutral | None | None | None | None | I |
E/N | 0.3356 | likely_benign | 0.3816 | ambiguous | -1.039 | Destabilizing | 0.067 | N | 0.148 | neutral | None | None | None | None | I |
E/P | 0.9615 | likely_pathogenic | 0.977 | pathogenic | 0.584 | Stabilizing | 0.974 | D | 0.529 | neutral | None | None | None | None | I |
E/Q | 0.1781 | likely_benign | 0.1923 | benign | -0.767 | Destabilizing | 0.891 | D | 0.402 | neutral | N | 0.517017364 | None | None | I |
E/R | 0.3634 | ambiguous | 0.4212 | ambiguous | -0.023 | Destabilizing | 0.915 | D | 0.424 | neutral | None | None | None | None | I |
E/S | 0.193 | likely_benign | 0.2053 | benign | -1.352 | Destabilizing | 0.172 | N | 0.125 | neutral | None | None | None | None | I |
E/T | 0.2096 | likely_benign | 0.2161 | benign | -0.954 | Destabilizing | 0.029 | N | 0.193 | neutral | None | None | None | None | I |
E/V | 0.3391 | likely_benign | 0.3728 | ambiguous | 0.584 | Stabilizing | 0.801 | D | 0.462 | neutral | N | 0.491140272 | None | None | I |
E/W | 0.9527 | likely_pathogenic | 0.9701 | pathogenic | 0.796 | Stabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | I |
E/Y | 0.773 | likely_pathogenic | 0.8245 | pathogenic | 0.874 | Stabilizing | 0.991 | D | 0.542 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.