Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30673 | 92242;92243;92244 | chr2:178549705;178549704;178549703 | chr2:179414432;179414431;179414430 |
N2AB | 29032 | 87319;87320;87321 | chr2:178549705;178549704;178549703 | chr2:179414432;179414431;179414430 |
N2A | 28105 | 84538;84539;84540 | chr2:178549705;178549704;178549703 | chr2:179414432;179414431;179414430 |
N2B | 21608 | 65047;65048;65049 | chr2:178549705;178549704;178549703 | chr2:179414432;179414431;179414430 |
Novex-1 | 21733 | 65422;65423;65424 | chr2:178549705;178549704;178549703 | chr2:179414432;179414431;179414430 |
Novex-2 | 21800 | 65623;65624;65625 | chr2:178549705;178549704;178549703 | chr2:179414432;179414431;179414430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.027 | N | 0.283 | 0.078 | 0.144782658237 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/N | rs779897504 | None | None | N | 0.125 | 0.117 | 0.0138822411134 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 5.77812E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs779897504 | None | None | N | 0.125 | 0.117 | 0.0138822411134 | gnomAD-4.0.0 | 9.91552E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.56665E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1703 | likely_benign | 0.1677 | benign | -0.018 | Destabilizing | 0.002 | N | 0.153 | neutral | None | None | None | None | N |
K/C | 0.3114 | likely_benign | 0.2632 | benign | 0.067 | Stabilizing | 0.935 | D | 0.242 | neutral | None | None | None | None | N |
K/D | 0.2408 | likely_benign | 0.2423 | benign | -0.058 | Destabilizing | 0.081 | N | 0.331 | neutral | None | None | None | None | N |
K/E | 0.1108 | likely_benign | 0.1206 | benign | -0.027 | Destabilizing | 0.027 | N | 0.283 | neutral | N | 0.412218128 | None | None | N |
K/F | 0.4566 | ambiguous | 0.4379 | ambiguous | -0.002 | Destabilizing | 0.38 | N | 0.271 | neutral | None | None | None | None | N |
K/G | 0.2394 | likely_benign | 0.218 | benign | -0.284 | Destabilizing | 0.035 | N | 0.304 | neutral | None | None | None | None | N |
K/H | 0.1087 | likely_benign | 0.1041 | benign | -0.656 | Destabilizing | 0.001 | N | 0.157 | neutral | None | None | None | None | N |
K/I | 0.2107 | likely_benign | 0.1965 | benign | 0.624 | Stabilizing | 0.484 | N | 0.291 | neutral | N | 0.506611157 | None | None | N |
K/L | 0.2354 | likely_benign | 0.2212 | benign | 0.624 | Stabilizing | 0.149 | N | 0.325 | neutral | None | None | None | None | N |
K/M | 0.1611 | likely_benign | 0.1537 | benign | 0.429 | Stabilizing | 0.791 | D | 0.268 | neutral | None | None | None | None | N |
K/N | 0.1188 | likely_benign | 0.1399 | benign | 0.274 | Stabilizing | None | N | 0.125 | neutral | N | 0.404369436 | None | None | N |
K/P | 0.6911 | likely_pathogenic | 0.7248 | pathogenic | 0.439 | Stabilizing | 0.555 | D | 0.327 | neutral | None | None | None | None | N |
K/Q | 0.0889 | likely_benign | 0.0851 | benign | 0.124 | Stabilizing | 0.117 | N | 0.309 | neutral | N | 0.49235378 | None | None | N |
K/R | 0.0713 | likely_benign | 0.0701 | benign | -0.155 | Destabilizing | 0.117 | N | 0.275 | neutral | N | 0.473594661 | None | None | N |
K/S | 0.1497 | likely_benign | 0.1508 | benign | -0.171 | Destabilizing | 0.035 | N | 0.257 | neutral | None | None | None | None | N |
K/T | 0.0866 | likely_benign | 0.0884 | benign | 0.017 | Stabilizing | 0.062 | N | 0.328 | neutral | N | 0.454680826 | None | None | N |
K/V | 0.1872 | likely_benign | 0.1678 | benign | 0.439 | Stabilizing | 0.149 | N | 0.347 | neutral | None | None | None | None | N |
K/W | 0.5512 | ambiguous | 0.5115 | ambiguous | -0.001 | Destabilizing | 0.935 | D | 0.297 | neutral | None | None | None | None | N |
K/Y | 0.2926 | likely_benign | 0.2714 | benign | 0.308 | Stabilizing | 0.235 | N | 0.287 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.