Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30675 | 92248;92249;92250 | chr2:178549699;178549698;178549697 | chr2:179414426;179414425;179414424 |
N2AB | 29034 | 87325;87326;87327 | chr2:178549699;178549698;178549697 | chr2:179414426;179414425;179414424 |
N2A | 28107 | 84544;84545;84546 | chr2:178549699;178549698;178549697 | chr2:179414426;179414425;179414424 |
N2B | 21610 | 65053;65054;65055 | chr2:178549699;178549698;178549697 | chr2:179414426;179414425;179414424 |
Novex-1 | 21735 | 65428;65429;65430 | chr2:178549699;178549698;178549697 | chr2:179414426;179414425;179414424 |
Novex-2 | 21802 | 65629;65630;65631 | chr2:178549699;178549698;178549697 | chr2:179414426;179414425;179414424 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs765085883 | 0.037 | 0.41 | N | 0.61 | 0.222 | 0.322510055762 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
E/A | rs765085883 | 0.037 | 0.41 | N | 0.61 | 0.222 | 0.322510055762 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | rs765085883 | 0.037 | 0.41 | N | 0.61 | 0.222 | 0.322510055762 | gnomAD-4.0.0 | 3.09843E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23806E-06 | 0 | 0 |
E/K | None | None | 0.41 | N | 0.579 | 0.186 | 0.263612267334 | gnomAD-4.0.0 | 1.59138E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85847E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1267 | likely_benign | 0.1257 | benign | -0.26 | Destabilizing | 0.41 | N | 0.61 | neutral | N | 0.464127029 | None | None | I |
E/C | 0.7699 | likely_pathogenic | 0.7558 | pathogenic | -0.122 | Destabilizing | 0.993 | D | 0.714 | prob.delet. | None | None | None | None | I |
E/D | 0.1125 | likely_benign | 0.1127 | benign | -0.316 | Destabilizing | 0.581 | D | 0.495 | neutral | N | 0.472591796 | None | None | I |
E/F | 0.6331 | likely_pathogenic | 0.6403 | pathogenic | -0.147 | Destabilizing | 0.993 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/G | 0.1469 | likely_benign | 0.1461 | benign | -0.44 | Destabilizing | 0.83 | D | 0.562 | neutral | N | 0.473170587 | None | None | I |
E/H | 0.3633 | ambiguous | 0.3526 | ambiguous | 0.229 | Stabilizing | 0.961 | D | 0.753 | deleterious | None | None | None | None | I |
E/I | 0.2518 | likely_benign | 0.2492 | benign | 0.174 | Stabilizing | 0.929 | D | 0.682 | prob.neutral | None | None | None | None | I |
E/K | 0.1037 | likely_benign | 0.1075 | benign | 0.333 | Stabilizing | 0.41 | N | 0.579 | neutral | N | 0.409428539 | None | None | I |
E/L | 0.2649 | likely_benign | 0.2514 | benign | 0.174 | Stabilizing | 0.866 | D | 0.64 | neutral | None | None | None | None | I |
E/M | 0.3436 | ambiguous | 0.3342 | benign | 0.124 | Stabilizing | 0.98 | D | 0.651 | neutral | None | None | None | None | I |
E/N | 0.2025 | likely_benign | 0.1981 | benign | 0.013 | Stabilizing | 0.866 | D | 0.71 | prob.delet. | None | None | None | None | I |
E/P | 0.3027 | likely_benign | 0.2798 | benign | 0.049 | Stabilizing | 0.929 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/Q | 0.1235 | likely_benign | 0.1146 | benign | 0.049 | Stabilizing | 0.01 | N | 0.283 | neutral | N | 0.430379815 | None | None | I |
E/R | 0.1964 | likely_benign | 0.1973 | benign | 0.583 | Stabilizing | 0.764 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/S | 0.1608 | likely_benign | 0.1541 | benign | -0.139 | Destabilizing | 0.48 | N | 0.63 | neutral | None | None | None | None | I |
E/T | 0.1583 | likely_benign | 0.1535 | benign | 0.011 | Stabilizing | 0.866 | D | 0.661 | neutral | None | None | None | None | I |
E/V | 0.1517 | likely_benign | 0.1524 | benign | 0.049 | Stabilizing | 0.83 | D | 0.629 | neutral | N | 0.480019201 | None | None | I |
E/W | 0.8367 | likely_pathogenic | 0.8386 | pathogenic | -0.019 | Destabilizing | 0.993 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/Y | 0.5333 | ambiguous | 0.5287 | ambiguous | 0.092 | Stabilizing | 0.929 | D | 0.671 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.