Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30694 | 92305;92306;92307 | chr2:178549642;178549641;178549640 | chr2:179414369;179414368;179414367 |
N2AB | 29053 | 87382;87383;87384 | chr2:178549642;178549641;178549640 | chr2:179414369;179414368;179414367 |
N2A | 28126 | 84601;84602;84603 | chr2:178549642;178549641;178549640 | chr2:179414369;179414368;179414367 |
N2B | 21629 | 65110;65111;65112 | chr2:178549642;178549641;178549640 | chr2:179414369;179414368;179414367 |
Novex-1 | 21754 | 65485;65486;65487 | chr2:178549642;178549641;178549640 | chr2:179414369;179414368;179414367 |
Novex-2 | 21821 | 65686;65687;65688 | chr2:178549642;178549641;178549640 | chr2:179414369;179414368;179414367 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1301174075 | -0.891 | None | D | 0.185 | 0.191 | 0.440288351245 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8767 | likely_pathogenic | 0.8884 | pathogenic | -2.508 | Highly Destabilizing | 0.104 | N | 0.545 | neutral | D | 0.569102439 | None | None | N |
V/C | 0.9487 | likely_pathogenic | 0.946 | pathogenic | -2.012 | Highly Destabilizing | 0.968 | D | 0.745 | deleterious | None | None | None | None | N |
V/D | 0.998 | likely_pathogenic | 0.9981 | pathogenic | -3.571 | Highly Destabilizing | 0.667 | D | 0.874 | deleterious | D | 0.647592509 | None | None | N |
V/E | 0.9933 | likely_pathogenic | 0.9936 | pathogenic | -3.258 | Highly Destabilizing | 0.726 | D | 0.837 | deleterious | None | None | None | None | N |
V/F | 0.7472 | likely_pathogenic | 0.8067 | pathogenic | -1.437 | Destabilizing | 0.497 | N | 0.721 | prob.delet. | D | 0.580458744 | None | None | N |
V/G | 0.955 | likely_pathogenic | 0.9606 | pathogenic | -3.098 | Highly Destabilizing | 0.667 | D | 0.856 | deleterious | D | 0.647592509 | None | None | N |
V/H | 0.9968 | likely_pathogenic | 0.9974 | pathogenic | -2.981 | Highly Destabilizing | 0.968 | D | 0.878 | deleterious | None | None | None | None | N |
V/I | 0.0684 | likely_benign | 0.0695 | benign | -0.783 | Destabilizing | None | N | 0.185 | neutral | D | 0.52988874 | None | None | N |
V/K | 0.9925 | likely_pathogenic | 0.9939 | pathogenic | -2.169 | Highly Destabilizing | 0.726 | D | 0.838 | deleterious | None | None | None | None | N |
V/L | 0.4292 | ambiguous | 0.4319 | ambiguous | -0.783 | Destabilizing | 0.009 | N | 0.281 | neutral | D | 0.531800611 | None | None | N |
V/M | 0.5816 | likely_pathogenic | 0.6223 | pathogenic | -1.053 | Destabilizing | 0.567 | D | 0.613 | neutral | None | None | None | None | N |
V/N | 0.9909 | likely_pathogenic | 0.9919 | pathogenic | -2.836 | Highly Destabilizing | 0.89 | D | 0.886 | deleterious | None | None | None | None | N |
V/P | 0.9933 | likely_pathogenic | 0.9938 | pathogenic | -1.341 | Destabilizing | 0.89 | D | 0.851 | deleterious | None | None | None | None | N |
V/Q | 0.9911 | likely_pathogenic | 0.9923 | pathogenic | -2.497 | Highly Destabilizing | 0.89 | D | 0.869 | deleterious | None | None | None | None | N |
V/R | 0.9872 | likely_pathogenic | 0.9897 | pathogenic | -2.188 | Highly Destabilizing | 0.726 | D | 0.881 | deleterious | None | None | None | None | N |
V/S | 0.9751 | likely_pathogenic | 0.9769 | pathogenic | -3.326 | Highly Destabilizing | 0.726 | D | 0.8 | deleterious | None | None | None | None | N |
V/T | 0.9314 | likely_pathogenic | 0.9343 | pathogenic | -2.863 | Highly Destabilizing | 0.272 | N | 0.58 | neutral | None | None | None | None | N |
V/W | 0.996 | likely_pathogenic | 0.9972 | pathogenic | -2.039 | Highly Destabilizing | 0.968 | D | 0.857 | deleterious | None | None | None | None | N |
V/Y | 0.9788 | likely_pathogenic | 0.9838 | pathogenic | -1.738 | Destabilizing | 0.726 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.