Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30700 | 92323;92324;92325 | chr2:178549624;178549623;178549622 | chr2:179414351;179414350;179414349 |
N2AB | 29059 | 87400;87401;87402 | chr2:178549624;178549623;178549622 | chr2:179414351;179414350;179414349 |
N2A | 28132 | 84619;84620;84621 | chr2:178549624;178549623;178549622 | chr2:179414351;179414350;179414349 |
N2B | 21635 | 65128;65129;65130 | chr2:178549624;178549623;178549622 | chr2:179414351;179414350;179414349 |
Novex-1 | 21760 | 65503;65504;65505 | chr2:178549624;178549623;178549622 | chr2:179414351;179414350;179414349 |
Novex-2 | 21827 | 65704;65705;65706 | chr2:178549624;178549623;178549622 | chr2:179414351;179414350;179414349 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs746552047 | -0.633 | 0.879 | N | 0.626 | 0.38 | 0.590258251349 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
F/S | rs746552047 | -0.633 | 0.879 | N | 0.626 | 0.38 | 0.590258251349 | gnomAD-4.0.0 | 6.36551E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14345E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7188 | likely_pathogenic | 0.8086 | pathogenic | -0.97 | Destabilizing | 0.575 | D | 0.615 | neutral | None | None | None | None | I |
F/C | 0.4809 | ambiguous | 0.5997 | pathogenic | -0.337 | Destabilizing | 0.988 | D | 0.703 | prob.neutral | N | 0.477056254 | None | None | I |
F/D | 0.9102 | likely_pathogenic | 0.9402 | pathogenic | 0.668 | Stabilizing | 0.906 | D | 0.697 | prob.neutral | None | None | None | None | I |
F/E | 0.9334 | likely_pathogenic | 0.9567 | pathogenic | 0.641 | Stabilizing | 0.906 | D | 0.697 | prob.neutral | None | None | None | None | I |
F/G | 0.9219 | likely_pathogenic | 0.942 | pathogenic | -1.161 | Destabilizing | 0.906 | D | 0.656 | neutral | None | None | None | None | I |
F/H | 0.5926 | likely_pathogenic | 0.6545 | pathogenic | 0.232 | Stabilizing | 0.991 | D | 0.594 | neutral | None | None | None | None | I |
F/I | 0.2962 | likely_benign | 0.4579 | ambiguous | -0.488 | Destabilizing | 0.003 | N | 0.389 | neutral | N | 0.447021348 | None | None | I |
F/K | 0.9471 | likely_pathogenic | 0.9621 | pathogenic | -0.098 | Destabilizing | 0.906 | D | 0.701 | prob.neutral | None | None | None | None | I |
F/L | 0.8931 | likely_pathogenic | 0.9375 | pathogenic | -0.488 | Destabilizing | 0.003 | N | 0.242 | neutral | N | 0.478960408 | None | None | I |
F/M | 0.5862 | likely_pathogenic | 0.6869 | pathogenic | -0.387 | Destabilizing | 0.826 | D | 0.481 | neutral | None | None | None | None | I |
F/N | 0.6912 | likely_pathogenic | 0.7888 | pathogenic | -0.053 | Destabilizing | 0.967 | D | 0.703 | prob.neutral | None | None | None | None | I |
F/P | 0.9949 | likely_pathogenic | 0.9965 | pathogenic | -0.629 | Destabilizing | 0.967 | D | 0.701 | prob.neutral | None | None | None | None | I |
F/Q | 0.8744 | likely_pathogenic | 0.9129 | pathogenic | -0.128 | Destabilizing | 0.967 | D | 0.702 | prob.neutral | None | None | None | None | I |
F/R | 0.8985 | likely_pathogenic | 0.9251 | pathogenic | 0.392 | Stabilizing | 0.906 | D | 0.704 | prob.neutral | None | None | None | None | I |
F/S | 0.6101 | likely_pathogenic | 0.7172 | pathogenic | -0.728 | Destabilizing | 0.879 | D | 0.626 | neutral | N | 0.467396621 | None | None | I |
F/T | 0.7085 | likely_pathogenic | 0.8083 | pathogenic | -0.661 | Destabilizing | 0.826 | D | 0.613 | neutral | None | None | None | None | I |
F/V | 0.3323 | likely_benign | 0.4933 | ambiguous | -0.629 | Destabilizing | 0.068 | N | 0.563 | neutral | N | 0.445173122 | None | None | I |
F/W | 0.4595 | ambiguous | 0.4709 | ambiguous | -0.324 | Destabilizing | 0.991 | D | 0.51 | neutral | None | None | None | None | I |
F/Y | 0.1161 | likely_benign | 0.1421 | benign | -0.296 | Destabilizing | 0.674 | D | 0.484 | neutral | N | 0.360077154 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.