Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30707 | 92344;92345;92346 | chr2:178549603;178549602;178549601 | chr2:179414330;179414329;179414328 |
N2AB | 29066 | 87421;87422;87423 | chr2:178549603;178549602;178549601 | chr2:179414330;179414329;179414328 |
N2A | 28139 | 84640;84641;84642 | chr2:178549603;178549602;178549601 | chr2:179414330;179414329;179414328 |
N2B | 21642 | 65149;65150;65151 | chr2:178549603;178549602;178549601 | chr2:179414330;179414329;179414328 |
Novex-1 | 21767 | 65524;65525;65526 | chr2:178549603;178549602;178549601 | chr2:179414330;179414329;179414328 |
Novex-2 | 21834 | 65725;65726;65727 | chr2:178549603;178549602;178549601 | chr2:179414330;179414329;179414328 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs778868795 | -0.208 | 0.104 | N | 0.575 | 0.189 | 0.29527378943 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
D/A | rs778868795 | -0.208 | 0.104 | N | 0.575 | 0.189 | 0.29527378943 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
D/A | rs778868795 | -0.208 | 0.104 | N | 0.575 | 0.189 | 0.29527378943 | gnomAD-4.0.0 | 2.23126E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.96725E-05 | 0 | 1.60138E-05 |
D/G | rs778868795 | -0.748 | 0.189 | N | 0.519 | 0.199 | 0.270447802918 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.01E-06 | 0 |
D/G | rs778868795 | -0.748 | 0.189 | N | 0.519 | 0.199 | 0.270447802918 | gnomAD-4.0.0 | 6.84361E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99679E-07 | 0 | 0 |
D/N | rs758300381 | -0.883 | 0.189 | N | 0.529 | 0.167 | 0.243398259712 | gnomAD-2.1.1 | 1.08E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.53704E-04 | None | 0 | None | 0 | 0 | 0 |
D/N | rs758300381 | -0.883 | 0.189 | N | 0.529 | 0.167 | 0.243398259712 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs758300381 | -0.883 | 0.189 | N | 0.529 | 0.167 | 0.243398259712 | gnomAD-4.0.0 | 3.84449E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.27273E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2172 | likely_benign | 0.2067 | benign | -0.4 | Destabilizing | 0.104 | N | 0.575 | neutral | N | 0.452918318 | None | None | N |
D/C | 0.6285 | likely_pathogenic | 0.5866 | pathogenic | -0.232 | Destabilizing | 0.962 | D | 0.686 | prob.delet. | None | None | None | None | N |
D/E | 0.1096 | likely_benign | 0.0986 | benign | -0.598 | Destabilizing | None | N | 0.257 | neutral | N | 0.34507599 | None | None | N |
D/F | 0.5443 | ambiguous | 0.5172 | ambiguous | 0.272 | Stabilizing | 0.87 | D | 0.715 | prob.delet. | None | None | None | None | N |
D/G | 0.363 | ambiguous | 0.3473 | ambiguous | -0.792 | Destabilizing | 0.189 | N | 0.519 | neutral | N | 0.506310086 | None | None | N |
D/H | 0.3983 | ambiguous | 0.3588 | ambiguous | -0.017 | Destabilizing | 0.862 | D | 0.537 | neutral | N | 0.481529072 | None | None | N |
D/I | 0.26 | likely_benign | 0.2342 | benign | 0.645 | Stabilizing | 0.687 | D | 0.721 | deleterious | None | None | None | None | N |
D/K | 0.5365 | ambiguous | 0.4928 | ambiguous | -0.35 | Destabilizing | 0.134 | N | 0.481 | neutral | None | None | None | None | N |
D/L | 0.3065 | likely_benign | 0.2701 | benign | 0.645 | Stabilizing | 0.519 | D | 0.7 | prob.delet. | None | None | None | None | N |
D/M | 0.5245 | ambiguous | 0.4959 | ambiguous | 0.988 | Stabilizing | 0.962 | D | 0.722 | deleterious | None | None | None | None | N |
D/N | 0.1578 | likely_benign | 0.1444 | benign | -0.916 | Destabilizing | 0.189 | N | 0.529 | neutral | N | 0.510638471 | None | None | N |
D/P | 0.7289 | likely_pathogenic | 0.6632 | pathogenic | 0.323 | Stabilizing | 0.687 | D | 0.5 | neutral | None | None | None | None | N |
D/Q | 0.3723 | ambiguous | 0.3339 | benign | -0.725 | Destabilizing | 0.351 | N | 0.494 | neutral | None | None | None | None | N |
D/R | 0.5949 | likely_pathogenic | 0.5647 | pathogenic | -0.115 | Destabilizing | 0.351 | N | 0.65 | prob.neutral | None | None | None | None | N |
D/S | 0.1954 | likely_benign | 0.1841 | benign | -1.181 | Destabilizing | 0.134 | N | 0.463 | neutral | None | None | None | None | N |
D/T | 0.2595 | likely_benign | 0.2299 | benign | -0.85 | Destabilizing | 0.519 | D | 0.539 | neutral | None | None | None | None | N |
D/V | 0.1672 | likely_benign | 0.1526 | benign | 0.323 | Stabilizing | 0.449 | N | 0.675 | prob.neutral | N | 0.447955216 | None | None | N |
D/W | 0.8809 | likely_pathogenic | 0.8692 | pathogenic | 0.488 | Stabilizing | 0.962 | D | 0.648 | neutral | None | None | None | None | N |
D/Y | 0.268 | likely_benign | 0.246 | benign | 0.53 | Stabilizing | 0.834 | D | 0.718 | prob.delet. | N | 0.51708444 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.