Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30710 | 92353;92354;92355 | chr2:178549594;178549593;178549592 | chr2:179414321;179414320;179414319 |
N2AB | 29069 | 87430;87431;87432 | chr2:178549594;178549593;178549592 | chr2:179414321;179414320;179414319 |
N2A | 28142 | 84649;84650;84651 | chr2:178549594;178549593;178549592 | chr2:179414321;179414320;179414319 |
N2B | 21645 | 65158;65159;65160 | chr2:178549594;178549593;178549592 | chr2:179414321;179414320;179414319 |
Novex-1 | 21770 | 65533;65534;65535 | chr2:178549594;178549593;178549592 | chr2:179414321;179414320;179414319 |
Novex-2 | 21837 | 65734;65735;65736 | chr2:178549594;178549593;178549592 | chr2:179414321;179414320;179414319 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs2154148331 | None | 0.986 | N | 0.722 | 0.282 | 0.371531589858 | gnomAD-4.0.0 | 3.18571E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72521E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0702 | likely_benign | 0.0788 | benign | -0.833 | Destabilizing | 0.058 | N | 0.304 | neutral | N | 0.486982459 | None | None | N |
P/C | 0.4956 | ambiguous | 0.5772 | pathogenic | -0.638 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/D | 0.6591 | likely_pathogenic | 0.712 | pathogenic | -0.714 | Destabilizing | 0.995 | D | 0.738 | deleterious | None | None | None | None | N |
P/E | 0.4603 | ambiguous | 0.5102 | ambiguous | -0.81 | Destabilizing | 0.989 | D | 0.676 | prob.neutral | None | None | None | None | N |
P/F | 0.6784 | likely_pathogenic | 0.7529 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
P/G | 0.4255 | ambiguous | 0.47 | ambiguous | -1.022 | Destabilizing | 0.929 | D | 0.641 | neutral | None | None | None | None | N |
P/H | 0.3525 | ambiguous | 0.4149 | ambiguous | -0.53 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
P/I | 0.4012 | ambiguous | 0.4617 | ambiguous | -0.466 | Destabilizing | 0.989 | D | 0.731 | deleterious | None | None | None | None | N |
P/K | 0.4985 | ambiguous | 0.5496 | ambiguous | -0.728 | Destabilizing | 0.989 | D | 0.683 | prob.neutral | None | None | None | None | N |
P/L | 0.2152 | likely_benign | 0.2649 | benign | -0.466 | Destabilizing | 0.986 | D | 0.626 | neutral | N | 0.512017385 | None | None | N |
P/M | 0.4241 | ambiguous | 0.4802 | ambiguous | -0.363 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
P/N | 0.5009 | ambiguous | 0.5547 | ambiguous | -0.414 | Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | N |
P/Q | 0.3131 | likely_benign | 0.3619 | ambiguous | -0.693 | Destabilizing | 0.993 | D | 0.759 | deleterious | N | 0.501763943 | None | None | N |
P/R | 0.3462 | ambiguous | 0.4106 | ambiguous | -0.116 | Destabilizing | 0.993 | D | 0.739 | deleterious | N | 0.486786787 | None | None | N |
P/S | 0.1623 | likely_benign | 0.1836 | benign | -0.8 | Destabilizing | 0.908 | D | 0.646 | neutral | N | 0.474163034 | None | None | N |
P/T | 0.131 | likely_benign | 0.1464 | benign | -0.798 | Destabilizing | 0.986 | D | 0.722 | deleterious | N | 0.493659641 | None | None | N |
P/V | 0.2516 | likely_benign | 0.2926 | benign | -0.552 | Destabilizing | 0.979 | D | 0.648 | neutral | None | None | None | None | N |
P/W | 0.8385 | likely_pathogenic | 0.8912 | pathogenic | -0.971 | Destabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | N |
P/Y | 0.6792 | likely_pathogenic | 0.7479 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.