Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30719 | 92380;92381;92382 | chr2:178549471;178549470;178549469 | chr2:179414198;179414197;179414196 |
N2AB | 29078 | 87457;87458;87459 | chr2:178549471;178549470;178549469 | chr2:179414198;179414197;179414196 |
N2A | 28151 | 84676;84677;84678 | chr2:178549471;178549470;178549469 | chr2:179414198;179414197;179414196 |
N2B | 21654 | 65185;65186;65187 | chr2:178549471;178549470;178549469 | chr2:179414198;179414197;179414196 |
Novex-1 | 21779 | 65560;65561;65562 | chr2:178549471;178549470;178549469 | chr2:179414198;179414197;179414196 |
Novex-2 | 21846 | 65761;65762;65763 | chr2:178549471;178549470;178549469 | chr2:179414198;179414197;179414196 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.314 | N | 0.737 | 0.249 | 0.73976330059 | gnomAD-4.0.0 | 1.62473E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.79018E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.178 | likely_benign | 0.1647 | benign | -0.829 | Destabilizing | 0.026 | N | 0.601 | neutral | N | 0.484883516 | None | None | I |
V/C | 0.7083 | likely_pathogenic | 0.6944 | pathogenic | -0.682 | Destabilizing | 0.934 | D | 0.653 | prob.neutral | None | None | None | None | I |
V/D | 0.5808 | likely_pathogenic | 0.5329 | ambiguous | -0.665 | Destabilizing | 0.314 | N | 0.737 | deleterious | N | 0.499726482 | None | None | I |
V/E | 0.3945 | ambiguous | 0.3397 | benign | -0.78 | Destabilizing | 0.378 | N | 0.734 | deleterious | None | None | None | None | I |
V/F | 0.2615 | likely_benign | 0.2523 | benign | -1.083 | Destabilizing | 0.314 | N | 0.661 | prob.neutral | N | 0.517830737 | None | None | I |
V/G | 0.3412 | ambiguous | 0.3283 | benign | -0.98 | Destabilizing | 0.314 | N | 0.657 | prob.neutral | N | 0.517830737 | None | None | I |
V/H | 0.6036 | likely_pathogenic | 0.5783 | pathogenic | -0.521 | Destabilizing | 0.934 | D | 0.762 | deleterious | None | None | None | None | I |
V/I | 0.0755 | likely_benign | 0.0763 | benign | -0.572 | Destabilizing | None | N | 0.279 | neutral | N | 0.472214477 | None | None | I |
V/K | 0.2967 | likely_benign | 0.2656 | benign | -0.527 | Destabilizing | 0.378 | N | 0.725 | deleterious | None | None | None | None | I |
V/L | 0.1608 | likely_benign | 0.1715 | benign | -0.572 | Destabilizing | None | N | 0.314 | neutral | N | 0.511302113 | None | None | I |
V/M | 0.1442 | likely_benign | 0.149 | benign | -0.355 | Destabilizing | 0.378 | N | 0.515 | neutral | None | None | None | None | I |
V/N | 0.3519 | ambiguous | 0.3388 | benign | -0.252 | Destabilizing | 0.378 | N | 0.721 | deleterious | None | None | None | None | I |
V/P | 0.3256 | likely_benign | 0.2921 | benign | -0.623 | Destabilizing | 0.552 | D | 0.74 | deleterious | None | None | None | None | I |
V/Q | 0.3138 | likely_benign | 0.2994 | benign | -0.586 | Destabilizing | 0.552 | D | 0.73 | deleterious | None | None | None | None | I |
V/R | 0.2718 | likely_benign | 0.2444 | benign | 0.057 | Stabilizing | 0.378 | N | 0.728 | deleterious | None | None | None | None | I |
V/S | 0.2613 | likely_benign | 0.2339 | benign | -0.644 | Destabilizing | 0.233 | N | 0.584 | neutral | None | None | None | None | I |
V/T | 0.143 | likely_benign | 0.1519 | benign | -0.666 | Destabilizing | 0.001 | N | 0.311 | neutral | None | None | None | None | I |
V/W | 0.8674 | likely_pathogenic | 0.8806 | pathogenic | -1.112 | Destabilizing | 0.934 | D | 0.841 | deleterious | None | None | None | None | I |
V/Y | 0.6186 | likely_pathogenic | 0.6075 | pathogenic | -0.807 | Destabilizing | 0.552 | D | 0.589 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.