Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30721 | 92386;92387;92388 | chr2:178549465;178549464;178549463 | chr2:179414192;179414191;179414190 |
N2AB | 29080 | 87463;87464;87465 | chr2:178549465;178549464;178549463 | chr2:179414192;179414191;179414190 |
N2A | 28153 | 84682;84683;84684 | chr2:178549465;178549464;178549463 | chr2:179414192;179414191;179414190 |
N2B | 21656 | 65191;65192;65193 | chr2:178549465;178549464;178549463 | chr2:179414192;179414191;179414190 |
Novex-1 | 21781 | 65566;65567;65568 | chr2:178549465;178549464;178549463 | chr2:179414192;179414191;179414190 |
Novex-2 | 21848 | 65767;65768;65769 | chr2:178549465;178549464;178549463 | chr2:179414192;179414191;179414190 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 1.0 | N | 0.843 | 0.462 | 0.478605750892 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0917 | likely_benign | 0.1079 | benign | -0.283 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.489678834 | None | None | N |
D/C | 0.4422 | ambiguous | 0.4916 | ambiguous | -0.103 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
D/E | 0.1267 | likely_benign | 0.1608 | benign | -0.78 | Destabilizing | 1.0 | D | 0.672 | neutral | N | 0.521636537 | None | None | N |
D/F | 0.5261 | ambiguous | 0.6514 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
D/G | 0.0943 | likely_benign | 0.0975 | benign | -0.592 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.376913476 | None | None | N |
D/H | 0.2115 | likely_benign | 0.2542 | benign | -0.759 | Destabilizing | 1.0 | D | 0.879 | deleterious | N | 0.495717691 | None | None | N |
D/I | 0.368 | ambiguous | 0.4965 | ambiguous | 0.511 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
D/K | 0.2789 | likely_benign | 0.3253 | benign | -0.349 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
D/L | 0.2808 | likely_benign | 0.3468 | ambiguous | 0.511 | Stabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
D/M | 0.4631 | ambiguous | 0.5685 | pathogenic | 0.886 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
D/N | 0.079 | likely_benign | 0.0991 | benign | -0.593 | Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.476599478 | None | None | N |
D/P | 0.7887 | likely_pathogenic | 0.8432 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
D/Q | 0.2386 | likely_benign | 0.2926 | benign | -0.489 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
D/R | 0.3186 | likely_benign | 0.3826 | ambiguous | -0.342 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
D/S | 0.0749 | likely_benign | 0.0835 | benign | -0.81 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
D/T | 0.1624 | likely_benign | 0.2017 | benign | -0.57 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
D/V | 0.2096 | likely_benign | 0.273 | benign | 0.273 | Stabilizing | 1.0 | D | 0.872 | deleterious | N | 0.495210712 | None | None | N |
D/W | 0.8627 | likely_pathogenic | 0.9171 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
D/Y | 0.232 | likely_benign | 0.2859 | benign | -0.117 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.506985091 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.