Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30722 | 92389;92390;92391 | chr2:178549462;178549461;178549460 | chr2:179414189;179414188;179414187 |
N2AB | 29081 | 87466;87467;87468 | chr2:178549462;178549461;178549460 | chr2:179414189;179414188;179414187 |
N2A | 28154 | 84685;84686;84687 | chr2:178549462;178549461;178549460 | chr2:179414189;179414188;179414187 |
N2B | 21657 | 65194;65195;65196 | chr2:178549462;178549461;178549460 | chr2:179414189;179414188;179414187 |
Novex-1 | 21782 | 65569;65570;65571 | chr2:178549462;178549461;178549460 | chr2:179414189;179414188;179414187 |
Novex-2 | 21849 | 65770;65771;65772 | chr2:178549462;178549461;178549460 | chr2:179414189;179414188;179414187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs2154148189 | None | 0.928 | N | 0.797 | 0.354 | 0.533179623451 | gnomAD-4.0.0 | 6.88776E-07 | None | None | None | None | N | None | 3.0259E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4849 | ambiguous | 0.4692 | ambiguous | -1.165 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
A/D | 0.5795 | likely_pathogenic | 0.5993 | pathogenic | -1.887 | Destabilizing | 0.978 | D | 0.9 | deleterious | D | 0.532147373 | None | None | N |
A/E | 0.3268 | likely_benign | 0.3396 | benign | -1.965 | Destabilizing | 0.983 | D | 0.859 | deleterious | None | None | None | None | N |
A/F | 0.4668 | ambiguous | 0.4936 | ambiguous | -1.343 | Destabilizing | 0.992 | D | 0.912 | deleterious | None | None | None | None | N |
A/G | 0.2068 | likely_benign | 0.2157 | benign | -1.144 | Destabilizing | 0.865 | D | 0.737 | prob.delet. | D | 0.532400862 | None | None | N |
A/H | 0.5661 | likely_pathogenic | 0.571 | pathogenic | -1.1 | Destabilizing | 0.998 | D | 0.898 | deleterious | None | None | None | None | N |
A/I | 0.3457 | ambiguous | 0.3531 | ambiguous | -0.67 | Destabilizing | 0.992 | D | 0.869 | deleterious | None | None | None | None | N |
A/K | 0.4472 | ambiguous | 0.4475 | ambiguous | -1.148 | Destabilizing | 0.968 | D | 0.855 | deleterious | None | None | None | None | N |
A/L | 0.3126 | likely_benign | 0.3144 | benign | -0.67 | Destabilizing | 0.944 | D | 0.83 | deleterious | None | None | None | None | N |
A/M | 0.3005 | likely_benign | 0.3032 | benign | -0.54 | Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
A/N | 0.4632 | ambiguous | 0.4757 | ambiguous | -0.981 | Destabilizing | 0.968 | D | 0.903 | deleterious | None | None | None | None | N |
A/P | 0.1933 | likely_benign | 0.2124 | benign | -0.736 | Destabilizing | 0.989 | D | 0.868 | deleterious | N | 0.403140072 | None | None | N |
A/Q | 0.342 | ambiguous | 0.3368 | benign | -1.307 | Destabilizing | 0.983 | D | 0.859 | deleterious | None | None | None | None | N |
A/R | 0.3914 | ambiguous | 0.3924 | ambiguous | -0.658 | Destabilizing | 0.983 | D | 0.863 | deleterious | None | None | None | None | N |
A/S | 0.1183 | likely_benign | 0.1157 | benign | -1.202 | Destabilizing | 0.284 | N | 0.48 | neutral | N | 0.481251195 | None | None | N |
A/T | 0.1322 | likely_benign | 0.1338 | benign | -1.213 | Destabilizing | 0.865 | D | 0.745 | deleterious | N | 0.514043118 | None | None | N |
A/V | 0.185 | likely_benign | 0.1687 | benign | -0.736 | Destabilizing | 0.928 | D | 0.797 | deleterious | N | 0.478492944 | None | None | N |
A/W | 0.8653 | likely_pathogenic | 0.8758 | pathogenic | -1.543 | Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
A/Y | 0.5974 | likely_pathogenic | 0.6068 | pathogenic | -1.178 | Destabilizing | 0.999 | D | 0.91 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.