Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30727 | 92404;92405;92406 | chr2:178549447;178549446;178549445 | chr2:179414174;179414173;179414172 |
N2AB | 29086 | 87481;87482;87483 | chr2:178549447;178549446;178549445 | chr2:179414174;179414173;179414172 |
N2A | 28159 | 84700;84701;84702 | chr2:178549447;178549446;178549445 | chr2:179414174;179414173;179414172 |
N2B | 21662 | 65209;65210;65211 | chr2:178549447;178549446;178549445 | chr2:179414174;179414173;179414172 |
Novex-1 | 21787 | 65584;65585;65586 | chr2:178549447;178549446;178549445 | chr2:179414174;179414173;179414172 |
Novex-2 | 21854 | 65785;65786;65787 | chr2:178549447;178549446;178549445 | chr2:179414174;179414173;179414172 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.896 | N | 0.634 | 0.405 | 0.431931272081 | gnomAD-4.0.0 | 6.87049E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03045E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1988 | likely_benign | 0.2232 | benign | -0.562 | Destabilizing | 0.896 | D | 0.634 | neutral | N | 0.493334153 | None | None | N |
E/C | 0.793 | likely_pathogenic | 0.8236 | pathogenic | -0.155 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
E/D | 0.1439 | likely_benign | 0.1825 | benign | -0.705 | Destabilizing | 0.004 | N | 0.23 | neutral | N | 0.483712595 | None | None | N |
E/F | 0.6791 | likely_pathogenic | 0.7474 | pathogenic | -0.26 | Destabilizing | 0.996 | D | 0.804 | deleterious | None | None | None | None | N |
E/G | 0.2623 | likely_benign | 0.3011 | benign | -0.842 | Destabilizing | 0.896 | D | 0.654 | neutral | N | 0.488334177 | None | None | N |
E/H | 0.4676 | ambiguous | 0.5121 | ambiguous | -0.335 | Destabilizing | 0.996 | D | 0.625 | neutral | None | None | None | None | N |
E/I | 0.2406 | likely_benign | 0.2817 | benign | 0.171 | Stabilizing | 0.988 | D | 0.807 | deleterious | None | None | None | None | N |
E/K | 0.188 | likely_benign | 0.2006 | benign | 0.021 | Stabilizing | 0.896 | D | 0.579 | neutral | N | 0.48717446 | None | None | N |
E/L | 0.3339 | likely_benign | 0.3758 | ambiguous | 0.171 | Stabilizing | 0.988 | D | 0.771 | deleterious | None | None | None | None | N |
E/M | 0.3775 | ambiguous | 0.4425 | ambiguous | 0.401 | Stabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
E/N | 0.2556 | likely_benign | 0.3269 | benign | -0.399 | Destabilizing | 0.851 | D | 0.568 | neutral | None | None | None | None | N |
E/P | 0.936 | likely_pathogenic | 0.951 | pathogenic | -0.052 | Destabilizing | 0.988 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/Q | 0.1378 | likely_benign | 0.1438 | benign | -0.325 | Destabilizing | 0.946 | D | 0.581 | neutral | N | 0.466707522 | None | None | N |
E/R | 0.3132 | likely_benign | 0.3369 | benign | 0.223 | Stabilizing | 0.988 | D | 0.599 | neutral | None | None | None | None | N |
E/S | 0.2138 | likely_benign | 0.2564 | benign | -0.592 | Destabilizing | 0.919 | D | 0.573 | neutral | None | None | None | None | N |
E/T | 0.2046 | likely_benign | 0.2423 | benign | -0.363 | Destabilizing | 0.959 | D | 0.668 | neutral | None | None | None | None | N |
E/V | 0.1596 | likely_benign | 0.1758 | benign | -0.052 | Destabilizing | 0.984 | D | 0.7 | prob.neutral | N | 0.465265945 | None | None | N |
E/W | 0.8965 | likely_pathogenic | 0.9216 | pathogenic | -0.053 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
E/Y | 0.5823 | likely_pathogenic | 0.6282 | pathogenic | -0.003 | Destabilizing | 0.996 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.