Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30735 | 92428;92429;92430 | chr2:178549423;178549422;178549421 | chr2:179414150;179414149;179414148 |
N2AB | 29094 | 87505;87506;87507 | chr2:178549423;178549422;178549421 | chr2:179414150;179414149;179414148 |
N2A | 28167 | 84724;84725;84726 | chr2:178549423;178549422;178549421 | chr2:179414150;179414149;179414148 |
N2B | 21670 | 65233;65234;65235 | chr2:178549423;178549422;178549421 | chr2:179414150;179414149;179414148 |
Novex-1 | 21795 | 65608;65609;65610 | chr2:178549423;178549422;178549421 | chr2:179414150;179414149;179414148 |
Novex-2 | 21862 | 65809;65810;65811 | chr2:178549423;178549422;178549421 | chr2:179414150;179414149;179414148 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1225964281 | None | 0.994 | N | 0.497 | 0.374 | 0.318828661733 | gnomAD-4.0.0 | 1.36972E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80069E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1132 | likely_benign | 0.1456 | benign | -0.459 | Destabilizing | 0.98 | D | 0.436 | neutral | None | None | None | None | N |
S/C | 0.1101 | likely_benign | 0.1343 | benign | -0.928 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.514540551 | None | None | N |
S/D | 0.7759 | likely_pathogenic | 0.8331 | pathogenic | -1.82 | Destabilizing | 0.996 | D | 0.481 | neutral | None | None | None | None | N |
S/E | 0.815 | likely_pathogenic | 0.8532 | pathogenic | -1.776 | Destabilizing | 0.996 | D | 0.489 | neutral | None | None | None | None | N |
S/F | 0.2784 | likely_benign | 0.3721 | ambiguous | -0.938 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
S/G | 0.1644 | likely_benign | 0.1858 | benign | -0.67 | Destabilizing | 0.994 | D | 0.443 | neutral | N | 0.510310589 | None | None | N |
S/H | 0.4923 | ambiguous | 0.5501 | ambiguous | -1.208 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
S/I | 0.4358 | ambiguous | 0.5324 | ambiguous | -0.001 | Destabilizing | 0.997 | D | 0.801 | deleterious | D | 0.545393464 | None | None | N |
S/K | 0.9424 | likely_pathogenic | 0.964 | pathogenic | -0.561 | Destabilizing | 0.996 | D | 0.481 | neutral | None | None | None | None | N |
S/L | 0.2058 | likely_benign | 0.2787 | benign | -0.001 | Destabilizing | 0.992 | D | 0.664 | neutral | None | None | None | None | N |
S/M | 0.2587 | likely_benign | 0.3311 | benign | 0.165 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
S/N | 0.2951 | likely_benign | 0.3312 | benign | -1.023 | Destabilizing | 0.994 | D | 0.497 | neutral | N | 0.505777912 | None | None | N |
S/P | 0.9914 | likely_pathogenic | 0.9945 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
S/Q | 0.728 | likely_pathogenic | 0.7736 | pathogenic | -1.246 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
S/R | 0.9074 | likely_pathogenic | 0.9391 | pathogenic | -0.426 | Destabilizing | 0.998 | D | 0.765 | deleterious | D | 0.527996771 | None | None | N |
S/T | 0.1068 | likely_benign | 0.1216 | benign | -0.748 | Destabilizing | 0.543 | D | 0.369 | neutral | D | 0.526874572 | None | None | N |
S/V | 0.3683 | ambiguous | 0.4687 | ambiguous | -0.123 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
S/W | 0.5751 | likely_pathogenic | 0.6629 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
S/Y | 0.2784 | likely_benign | 0.35 | ambiguous | -0.65 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.