Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30736 | 92431;92432;92433 | chr2:178549420;178549419;178549418 | chr2:179414147;179414146;179414145 |
N2AB | 29095 | 87508;87509;87510 | chr2:178549420;178549419;178549418 | chr2:179414147;179414146;179414145 |
N2A | 28168 | 84727;84728;84729 | chr2:178549420;178549419;178549418 | chr2:179414147;179414146;179414145 |
N2B | 21671 | 65236;65237;65238 | chr2:178549420;178549419;178549418 | chr2:179414147;179414146;179414145 |
Novex-1 | 21796 | 65611;65612;65613 | chr2:178549420;178549419;178549418 | chr2:179414147;179414146;179414145 |
Novex-2 | 21863 | 65812;65813;65814 | chr2:178549420;178549419;178549418 | chr2:179414147;179414146;179414145 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 1.0 | N | 0.817 | 0.505 | 0.701105732878 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7361 | likely_pathogenic | 0.7875 | pathogenic | -2.937 | Highly Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/C | 0.8731 | likely_pathogenic | 0.8999 | pathogenic | -2.539 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
I/D | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -3.448 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
I/E | 0.9956 | likely_pathogenic | 0.9962 | pathogenic | -3.131 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/F | 0.6588 | likely_pathogenic | 0.7137 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.488689799 | None | None | N |
I/G | 0.9778 | likely_pathogenic | 0.9849 | pathogenic | -3.556 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
I/H | 0.9943 | likely_pathogenic | 0.9956 | pathogenic | -3.18 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
I/K | 0.9932 | likely_pathogenic | 0.9937 | pathogenic | -2.199 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
I/L | 0.1878 | likely_benign | 0.2131 | benign | -1.083 | Destabilizing | 0.993 | D | 0.344 | neutral | N | 0.473434372 | None | None | N |
I/M | 0.1756 | likely_benign | 0.1929 | benign | -1.444 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.442946467 | None | None | N |
I/N | 0.9827 | likely_pathogenic | 0.9834 | pathogenic | -2.856 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.525711684 | None | None | N |
I/P | 0.9976 | likely_pathogenic | 0.9986 | pathogenic | -1.691 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/Q | 0.9901 | likely_pathogenic | 0.9911 | pathogenic | -2.527 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/R | 0.9869 | likely_pathogenic | 0.9888 | pathogenic | -2.196 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/S | 0.9427 | likely_pathogenic | 0.9534 | pathogenic | -3.513 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | N | 0.495744144 | None | None | N |
I/T | 0.9161 | likely_pathogenic | 0.9278 | pathogenic | -3.025 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.498453169 | None | None | N |
I/V | 0.0924 | likely_benign | 0.1048 | benign | -1.691 | Destabilizing | 0.993 | D | 0.279 | neutral | N | 0.420624181 | None | None | N |
I/W | 0.9949 | likely_pathogenic | 0.9967 | pathogenic | -2.127 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
I/Y | 0.9705 | likely_pathogenic | 0.9759 | pathogenic | -1.943 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.