Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30738 | 92437;92438;92439 | chr2:178549414;178549413;178549412 | chr2:179414141;179414140;179414139 |
N2AB | 29097 | 87514;87515;87516 | chr2:178549414;178549413;178549412 | chr2:179414141;179414140;179414139 |
N2A | 28170 | 84733;84734;84735 | chr2:178549414;178549413;178549412 | chr2:179414141;179414140;179414139 |
N2B | 21673 | 65242;65243;65244 | chr2:178549414;178549413;178549412 | chr2:179414141;179414140;179414139 |
Novex-1 | 21798 | 65617;65618;65619 | chr2:178549414;178549413;178549412 | chr2:179414141;179414140;179414139 |
Novex-2 | 21865 | 65818;65819;65820 | chr2:178549414;178549413;178549412 | chr2:179414141;179414140;179414139 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.984 | D | 0.844 | 0.625 | 0.848371208543 | gnomAD-4.0.0 | 4.8013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8915 | likely_pathogenic | 0.9052 | pathogenic | -2.724 | Highly Destabilizing | 0.851 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/C | 0.8255 | likely_pathogenic | 0.8702 | pathogenic | -1.855 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -3.393 | Highly Destabilizing | 0.988 | D | 0.883 | deleterious | None | None | None | None | N |
L/E | 0.9954 | likely_pathogenic | 0.9958 | pathogenic | -3.057 | Highly Destabilizing | 0.988 | D | 0.848 | deleterious | None | None | None | None | N |
L/F | 0.7859 | likely_pathogenic | 0.8195 | pathogenic | -1.61 | Destabilizing | 0.976 | D | 0.665 | neutral | None | None | None | None | N |
L/G | 0.9903 | likely_pathogenic | 0.9919 | pathogenic | -3.353 | Highly Destabilizing | 0.988 | D | 0.842 | deleterious | None | None | None | None | N |
L/H | 0.9923 | likely_pathogenic | 0.9929 | pathogenic | -3.134 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
L/I | 0.1019 | likely_benign | 0.1003 | benign | -0.829 | Destabilizing | 0.702 | D | 0.609 | neutral | None | None | None | None | N |
L/K | 0.9953 | likely_pathogenic | 0.995 | pathogenic | -2.026 | Highly Destabilizing | 0.988 | D | 0.792 | deleterious | None | None | None | None | N |
L/M | 0.2707 | likely_benign | 0.287 | benign | -1.017 | Destabilizing | 0.64 | D | 0.529 | neutral | N | 0.512605222 | None | None | N |
L/N | 0.9959 | likely_pathogenic | 0.996 | pathogenic | -2.769 | Highly Destabilizing | 0.988 | D | 0.88 | deleterious | None | None | None | None | N |
L/P | 0.997 | likely_pathogenic | 0.9968 | pathogenic | -1.452 | Destabilizing | 0.995 | D | 0.883 | deleterious | D | 0.554689535 | None | None | N |
L/Q | 0.9834 | likely_pathogenic | 0.9847 | pathogenic | -2.374 | Highly Destabilizing | 0.984 | D | 0.847 | deleterious | D | 0.554689535 | None | None | N |
L/R | 0.9895 | likely_pathogenic | 0.9902 | pathogenic | -2.159 | Highly Destabilizing | 0.984 | D | 0.844 | deleterious | D | 0.554689535 | None | None | N |
L/S | 0.9878 | likely_pathogenic | 0.9895 | pathogenic | -3.315 | Highly Destabilizing | 0.952 | D | 0.785 | deleterious | None | None | None | None | N |
L/T | 0.9241 | likely_pathogenic | 0.9338 | pathogenic | -2.807 | Highly Destabilizing | 0.261 | N | 0.601 | neutral | None | None | None | None | N |
L/V | 0.085 | likely_benign | 0.0928 | benign | -1.452 | Destabilizing | 0.026 | N | 0.312 | neutral | N | 0.44606413 | None | None | N |
L/W | 0.9872 | likely_pathogenic | 0.9896 | pathogenic | -2.038 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
L/Y | 0.9838 | likely_pathogenic | 0.9857 | pathogenic | -1.819 | Destabilizing | 0.988 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.