Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30739 | 92440;92441;92442 | chr2:178549411;178549410;178549409 | chr2:179414138;179414137;179414136 |
N2AB | 29098 | 87517;87518;87519 | chr2:178549411;178549410;178549409 | chr2:179414138;179414137;179414136 |
N2A | 28171 | 84736;84737;84738 | chr2:178549411;178549410;178549409 | chr2:179414138;179414137;179414136 |
N2B | 21674 | 65245;65246;65247 | chr2:178549411;178549410;178549409 | chr2:179414138;179414137;179414136 |
Novex-1 | 21799 | 65620;65621;65622 | chr2:178549411;178549410;178549409 | chr2:179414138;179414137;179414136 |
Novex-2 | 21866 | 65821;65822;65823 | chr2:178549411;178549410;178549409 | chr2:179414138;179414137;179414136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.988 | N | 0.523 | 0.372 | 0.537402380065 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02535E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0937 | likely_benign | 0.1143 | benign | -1.035 | Destabilizing | 0.826 | D | 0.427 | neutral | N | 0.471709149 | None | None | N |
T/C | 0.2551 | likely_benign | 0.3131 | benign | -0.645 | Destabilizing | 0.046 | N | 0.323 | neutral | None | None | None | None | N |
T/D | 0.5323 | ambiguous | 0.6268 | pathogenic | -0.956 | Destabilizing | 0.884 | D | 0.439 | neutral | None | None | None | None | N |
T/E | 0.4239 | ambiguous | 0.5031 | ambiguous | -0.837 | Destabilizing | 0.939 | D | 0.501 | neutral | None | None | None | None | N |
T/F | 0.2119 | likely_benign | 0.2835 | benign | -0.699 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | N |
T/G | 0.2376 | likely_benign | 0.3044 | benign | -1.411 | Destabilizing | 0.939 | D | 0.461 | neutral | None | None | None | None | N |
T/H | 0.2185 | likely_benign | 0.269 | benign | -1.592 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
T/I | 0.1549 | likely_benign | 0.1731 | benign | -0.078 | Destabilizing | 0.988 | D | 0.523 | neutral | N | 0.492261424 | None | None | N |
T/K | 0.2934 | likely_benign | 0.3454 | ambiguous | -0.748 | Destabilizing | 0.92 | D | 0.477 | neutral | N | 0.51419049 | None | None | N |
T/L | 0.0924 | likely_benign | 0.1087 | benign | -0.078 | Destabilizing | 0.939 | D | 0.419 | neutral | None | None | None | None | N |
T/M | 0.0868 | likely_benign | 0.0995 | benign | 0.065 | Stabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
T/N | 0.1246 | likely_benign | 0.1522 | benign | -1.065 | Destabilizing | 0.17 | N | 0.392 | neutral | None | None | None | None | N |
T/P | 0.6475 | likely_pathogenic | 0.7079 | pathogenic | -0.364 | Destabilizing | 0.996 | D | 0.546 | neutral | N | 0.51875947 | None | None | N |
T/Q | 0.2322 | likely_benign | 0.2638 | benign | -1.011 | Destabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | N |
T/R | 0.2367 | likely_benign | 0.2877 | benign | -0.753 | Destabilizing | 0.988 | D | 0.539 | neutral | N | 0.508283238 | None | None | N |
T/S | 0.0992 | likely_benign | 0.119 | benign | -1.321 | Destabilizing | 0.826 | D | 0.431 | neutral | N | 0.414964858 | None | None | N |
T/V | 0.1261 | likely_benign | 0.1472 | benign | -0.364 | Destabilizing | 0.939 | D | 0.361 | neutral | None | None | None | None | N |
T/W | 0.5468 | ambiguous | 0.6626 | pathogenic | -0.751 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
T/Y | 0.245 | likely_benign | 0.3099 | benign | -0.46 | Destabilizing | 0.997 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.