Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30750 | 92473;92474;92475 | chr2:178549378;178549377;178549376 | chr2:179414105;179414104;179414103 |
N2AB | 29109 | 87550;87551;87552 | chr2:178549378;178549377;178549376 | chr2:179414105;179414104;179414103 |
N2A | 28182 | 84769;84770;84771 | chr2:178549378;178549377;178549376 | chr2:179414105;179414104;179414103 |
N2B | 21685 | 65278;65279;65280 | chr2:178549378;178549377;178549376 | chr2:179414105;179414104;179414103 |
Novex-1 | 21810 | 65653;65654;65655 | chr2:178549378;178549377;178549376 | chr2:179414105;179414104;179414103 |
Novex-2 | 21877 | 65854;65855;65856 | chr2:178549378;178549377;178549376 | chr2:179414105;179414104;179414103 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.993 | N | 0.601 | 0.408 | 0.4018988957 | gnomAD-4.0.0 | 6.84205E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99457E-07 | 0 | 0 |
E/V | None | None | 0.997 | N | 0.687 | 0.455 | 0.488757021912 | gnomAD-4.0.0 | 6.84205E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1446 | likely_benign | 0.1465 | benign | -0.295 | Destabilizing | 0.977 | D | 0.603 | neutral | N | 0.497183597 | None | None | I |
E/C | 0.8057 | likely_pathogenic | 0.807 | pathogenic | 0.076 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/D | 0.087 | likely_benign | 0.0842 | benign | -0.243 | Destabilizing | 0.117 | N | 0.213 | neutral | N | 0.480501991 | None | None | I |
E/F | 0.7535 | likely_pathogenic | 0.758 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
E/G | 0.1829 | likely_benign | 0.1819 | benign | -0.475 | Destabilizing | 0.993 | D | 0.601 | neutral | N | 0.480424593 | None | None | I |
E/H | 0.4294 | ambiguous | 0.4423 | ambiguous | -0.062 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/I | 0.3527 | ambiguous | 0.3504 | ambiguous | 0.137 | Stabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | I |
E/K | 0.1509 | likely_benign | 0.1488 | benign | 0.388 | Stabilizing | 0.977 | D | 0.584 | neutral | N | 0.463801742 | None | None | I |
E/L | 0.4125 | ambiguous | 0.4108 | ambiguous | 0.137 | Stabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | I |
E/M | 0.4746 | ambiguous | 0.4723 | ambiguous | 0.253 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
E/N | 0.2018 | likely_benign | 0.2066 | benign | 0.171 | Stabilizing | 0.99 | D | 0.704 | prob.neutral | None | None | None | None | I |
E/P | 0.2844 | likely_benign | 0.2813 | benign | 0.013 | Stabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/Q | 0.149 | likely_benign | 0.1546 | benign | 0.191 | Stabilizing | 0.997 | D | 0.647 | neutral | N | 0.507053874 | None | None | I |
E/R | 0.255 | likely_benign | 0.2509 | benign | 0.541 | Stabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/S | 0.1818 | likely_benign | 0.1858 | benign | -0.009 | Destabilizing | 0.983 | D | 0.608 | neutral | None | None | None | None | I |
E/T | 0.2157 | likely_benign | 0.217 | benign | 0.136 | Stabilizing | 0.995 | D | 0.642 | neutral | None | None | None | None | I |
E/V | 0.2143 | likely_benign | 0.2111 | benign | 0.013 | Stabilizing | 0.997 | D | 0.687 | prob.neutral | N | 0.488880836 | None | None | I |
E/W | 0.9012 | likely_pathogenic | 0.9012 | pathogenic | -0.174 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
E/Y | 0.6039 | likely_pathogenic | 0.6142 | pathogenic | -0.045 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.