Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30751 | 92476;92477;92478 | chr2:178549375;178549374;178549373 | chr2:179414102;179414101;179414100 |
N2AB | 29110 | 87553;87554;87555 | chr2:178549375;178549374;178549373 | chr2:179414102;179414101;179414100 |
N2A | 28183 | 84772;84773;84774 | chr2:178549375;178549374;178549373 | chr2:179414102;179414101;179414100 |
N2B | 21686 | 65281;65282;65283 | chr2:178549375;178549374;178549373 | chr2:179414102;179414101;179414100 |
Novex-1 | 21811 | 65656;65657;65658 | chr2:178549375;178549374;178549373 | chr2:179414102;179414101;179414100 |
Novex-2 | 21878 | 65857;65858;65859 | chr2:178549375;178549374;178549373 | chr2:179414102;179414101;179414100 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 1.0 | D | 0.832 | 0.428 | 0.614131634805 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8582E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9815 | likely_pathogenic | 0.9808 | pathogenic | -2.599 | Highly Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | I |
I/C | 0.9824 | likely_pathogenic | 0.9837 | pathogenic | -1.923 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
I/D | 0.998 | likely_pathogenic | 0.9977 | pathogenic | -2.816 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | I |
I/E | 0.9944 | likely_pathogenic | 0.9929 | pathogenic | -2.69 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | I |
I/F | 0.8637 | likely_pathogenic | 0.86 | pathogenic | -1.676 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.547743186 | None | None | I |
I/G | 0.9955 | likely_pathogenic | 0.9951 | pathogenic | -3.064 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | I |
I/H | 0.9949 | likely_pathogenic | 0.9941 | pathogenic | -2.357 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
I/K | 0.9864 | likely_pathogenic | 0.983 | pathogenic | -2.021 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | I |
I/L | 0.4281 | ambiguous | 0.45 | ambiguous | -1.292 | Destabilizing | 0.993 | D | 0.437 | neutral | N | 0.485187988 | None | None | I |
I/M | 0.5623 | ambiguous | 0.5583 | ambiguous | -1.149 | Destabilizing | 1.0 | D | 0.832 | deleterious | D | 0.556861447 | None | None | I |
I/N | 0.9662 | likely_pathogenic | 0.9554 | pathogenic | -2.103 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.56923171 | None | None | I |
I/P | 0.9639 | likely_pathogenic | 0.9588 | pathogenic | -1.705 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | I |
I/Q | 0.9912 | likely_pathogenic | 0.9892 | pathogenic | -2.151 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
I/R | 0.9845 | likely_pathogenic | 0.9815 | pathogenic | -1.483 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
I/S | 0.9812 | likely_pathogenic | 0.9798 | pathogenic | -2.766 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.550531571 | None | None | I |
I/T | 0.9642 | likely_pathogenic | 0.9656 | pathogenic | -2.511 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.539010681 | None | None | I |
I/V | 0.1807 | likely_benign | 0.2182 | benign | -1.705 | Destabilizing | 0.993 | D | 0.405 | neutral | N | 0.471412146 | None | None | I |
I/W | 0.9954 | likely_pathogenic | 0.9956 | pathogenic | -1.946 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
I/Y | 0.9773 | likely_pathogenic | 0.9742 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.