Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30759 | 92500;92501;92502 | chr2:178549351;178549350;178549349 | chr2:179414078;179414077;179414076 |
N2AB | 29118 | 87577;87578;87579 | chr2:178549351;178549350;178549349 | chr2:179414078;179414077;179414076 |
N2A | 28191 | 84796;84797;84798 | chr2:178549351;178549350;178549349 | chr2:179414078;179414077;179414076 |
N2B | 21694 | 65305;65306;65307 | chr2:178549351;178549350;178549349 | chr2:179414078;179414077;179414076 |
Novex-1 | 21819 | 65680;65681;65682 | chr2:178549351;178549350;178549349 | chr2:179414078;179414077;179414076 |
Novex-2 | 21886 | 65881;65882;65883 | chr2:178549351;178549350;178549349 | chr2:179414078;179414077;179414076 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs769687279 | -1.133 | 0.997 | N | 0.46 | 0.33 | 0.418344901717 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
R/K | rs769687279 | -1.133 | 0.997 | N | 0.46 | 0.33 | 0.418344901717 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9877 | likely_pathogenic | 0.9853 | pathogenic | -2.103 | Highly Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
R/C | 0.7241 | likely_pathogenic | 0.6708 | pathogenic | -2.026 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
R/D | 0.9985 | likely_pathogenic | 0.9978 | pathogenic | -1.11 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
R/E | 0.9761 | likely_pathogenic | 0.9687 | pathogenic | -0.888 | Destabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
R/F | 0.987 | likely_pathogenic | 0.9831 | pathogenic | -1.334 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
R/G | 0.9758 | likely_pathogenic | 0.9687 | pathogenic | -2.461 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.51424002 | None | None | N |
R/H | 0.5009 | ambiguous | 0.4099 | ambiguous | -2.208 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
R/I | 0.9767 | likely_pathogenic | 0.9715 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.529128271 | None | None | N |
R/K | 0.2994 | likely_benign | 0.2686 | benign | -1.421 | Destabilizing | 0.997 | D | 0.46 | neutral | N | 0.475786817 | None | None | N |
R/L | 0.9197 | likely_pathogenic | 0.9014 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
R/M | 0.9509 | likely_pathogenic | 0.9363 | pathogenic | -1.475 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
R/N | 0.9934 | likely_pathogenic | 0.9905 | pathogenic | -1.469 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
R/P | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
R/Q | 0.4799 | ambiguous | 0.4174 | ambiguous | -1.346 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
R/S | 0.9944 | likely_pathogenic | 0.9929 | pathogenic | -2.403 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.492600138 | None | None | N |
R/T | 0.9886 | likely_pathogenic | 0.9853 | pathogenic | -1.957 | Destabilizing | 1.0 | D | 0.774 | deleterious | D | 0.525089346 | None | None | N |
R/V | 0.9818 | likely_pathogenic | 0.9773 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
R/W | 0.8194 | likely_pathogenic | 0.7599 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
R/Y | 0.9549 | likely_pathogenic | 0.9395 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.