Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3076 | 9451;9452;9453 | chr2:178768093;178768092;178768091 | chr2:179632820;179632819;179632818 |
N2AB | 3076 | 9451;9452;9453 | chr2:178768093;178768092;178768091 | chr2:179632820;179632819;179632818 |
N2A | 3076 | 9451;9452;9453 | chr2:178768093;178768092;178768091 | chr2:179632820;179632819;179632818 |
N2B | 3030 | 9313;9314;9315 | chr2:178768093;178768092;178768091 | chr2:179632820;179632819;179632818 |
Novex-1 | 3030 | 9313;9314;9315 | chr2:178768093;178768092;178768091 | chr2:179632820;179632819;179632818 |
Novex-2 | 3030 | 9313;9314;9315 | chr2:178768093;178768092;178768091 | chr2:179632820;179632819;179632818 |
Novex-3 | 3076 | 9451;9452;9453 | chr2:178768093;178768092;178768091 | chr2:179632820;179632819;179632818 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs144592053 | -0.676 | None | N | 0.197 | 0.086 | 0.132336055621 | gnomAD-2.1.1 | 1.59E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.53E-05 | 0 |
M/I | rs144592053 | -0.676 | None | N | 0.197 | 0.086 | 0.132336055621 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/I | rs144592053 | -0.676 | None | N | 0.197 | 0.086 | 0.132336055621 | gnomAD-4.0.0 | 5.57621E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23005E-05 | None | 0 | 0 | 6.77955E-06 | 0 | 0 |
M/L | rs766144077 | -0.7 | None | N | 0.2 | 0.115 | 0.139678290688 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 1.23031E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/L | rs766144077 | -0.7 | None | N | 0.2 | 0.115 | 0.139678290688 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/L | rs766144077 | -0.7 | None | N | 0.2 | 0.115 | 0.139678290688 | gnomAD-4.0.0 | 1.85871E-06 | None | None | None | None | N | None | 4.0031E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/V | rs766144077 | -1.033 | None | N | 0.196 | 0.062 | 0.0611884634855 | gnomAD-2.1.1 | 7.08E-06 | None | None | None | None | N | None | 4E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.76E-06 | 0 |
M/V | rs766144077 | -1.033 | None | N | 0.196 | 0.062 | 0.0611884634855 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 4.82E-05 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/V | rs766144077 | -1.033 | None | N | 0.196 | 0.062 | 0.0611884634855 | gnomAD-4.0.0 | 6.81526E-06 | None | None | None | None | N | None | 2.66873E-05 | 1.66667E-05 | None | 0 | 0 | None | 0 | 0 | 3.3898E-06 | 0 | 6.40143E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3747 | ambiguous | 0.5389 | ambiguous | -1.949 | Destabilizing | 0.002 | N | 0.294 | neutral | None | None | None | None | N |
M/C | 0.7173 | likely_pathogenic | 0.8491 | pathogenic | -1.389 | Destabilizing | 0.245 | N | 0.467 | neutral | None | None | None | None | N |
M/D | 0.9495 | likely_pathogenic | 0.9715 | pathogenic | -0.712 | Destabilizing | 0.018 | N | 0.484 | neutral | None | None | None | None | N |
M/E | 0.7385 | likely_pathogenic | 0.802 | pathogenic | -0.617 | Destabilizing | 0.018 | N | 0.448 | neutral | None | None | None | None | N |
M/F | 0.4451 | ambiguous | 0.5539 | ambiguous | -0.674 | Destabilizing | 0.009 | N | 0.457 | neutral | None | None | None | None | N |
M/G | 0.7422 | likely_pathogenic | 0.8657 | pathogenic | -2.316 | Highly Destabilizing | 0.018 | N | 0.413 | neutral | None | None | None | None | N |
M/H | 0.7119 | likely_pathogenic | 0.8134 | pathogenic | -1.321 | Destabilizing | 0.497 | N | 0.515 | neutral | None | None | None | None | N |
M/I | 0.267 | likely_benign | 0.3971 | ambiguous | -0.96 | Destabilizing | None | N | 0.197 | neutral | N | 0.321771962 | None | None | N |
M/K | 0.5448 | ambiguous | 0.6421 | pathogenic | -0.836 | Destabilizing | 0.014 | N | 0.417 | neutral | N | 0.340617602 | None | None | N |
M/L | 0.1385 | likely_benign | 0.1975 | benign | -0.96 | Destabilizing | None | N | 0.2 | neutral | N | 0.34620646 | None | None | N |
M/N | 0.6194 | likely_pathogenic | 0.7582 | pathogenic | -0.827 | Destabilizing | 0.018 | N | 0.513 | neutral | None | None | None | None | N |
M/P | 0.9863 | likely_pathogenic | 0.9925 | pathogenic | -1.265 | Destabilizing | 0.085 | N | 0.553 | neutral | None | None | None | None | N |
M/Q | 0.4298 | ambiguous | 0.5378 | ambiguous | -0.794 | Destabilizing | 0.085 | N | 0.471 | neutral | None | None | None | None | N |
M/R | 0.5792 | likely_pathogenic | 0.6566 | pathogenic | -0.432 | Destabilizing | 0.065 | N | 0.524 | neutral | N | 0.341589183 | None | None | N |
M/S | 0.3707 | ambiguous | 0.5405 | ambiguous | -1.476 | Destabilizing | None | N | 0.253 | neutral | None | None | None | None | N |
M/T | 0.1621 | likely_benign | 0.2785 | benign | -1.264 | Destabilizing | None | N | 0.253 | neutral | N | 0.288286345 | None | None | N |
M/V | 0.0624 | likely_benign | 0.0692 | benign | -1.265 | Destabilizing | None | N | 0.196 | neutral | N | 0.318635227 | None | None | N |
M/W | 0.829 | likely_pathogenic | 0.884 | pathogenic | -0.666 | Destabilizing | 0.497 | N | 0.463 | neutral | None | None | None | None | N |
M/Y | 0.7126 | likely_pathogenic | 0.8166 | pathogenic | -0.72 | Destabilizing | 0.085 | N | 0.531 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.