Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30767 | 92524;92525;92526 | chr2:178549327;178549326;178549325 | chr2:179414054;179414053;179414052 |
N2AB | 29126 | 87601;87602;87603 | chr2:178549327;178549326;178549325 | chr2:179414054;179414053;179414052 |
N2A | 28199 | 84820;84821;84822 | chr2:178549327;178549326;178549325 | chr2:179414054;179414053;179414052 |
N2B | 21702 | 65329;65330;65331 | chr2:178549327;178549326;178549325 | chr2:179414054;179414053;179414052 |
Novex-1 | 21827 | 65704;65705;65706 | chr2:178549327;178549326;178549325 | chr2:179414054;179414053;179414052 |
Novex-2 | 21894 | 65905;65906;65907 | chr2:178549327;178549326;178549325 | chr2:179414054;179414053;179414052 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1698403843 | None | 0.999 | D | 0.619 | 0.313 | 0.666729369348 | gnomAD-4.0.0 | 4.77318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57358E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4902 | ambiguous | 0.4402 | ambiguous | -1.241 | Destabilizing | 0.999 | D | 0.619 | neutral | D | 0.522655257 | None | None | N |
V/C | 0.8216 | likely_pathogenic | 0.797 | pathogenic | -0.859 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
V/D | 0.8203 | likely_pathogenic | 0.7768 | pathogenic | -0.944 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/E | 0.6417 | likely_pathogenic | 0.5937 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.511939618 | None | None | N |
V/F | 0.2993 | likely_benign | 0.2634 | benign | -0.898 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
V/G | 0.4433 | ambiguous | 0.389 | ambiguous | -1.52 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.487702294 | None | None | N |
V/H | 0.806 | likely_pathogenic | 0.7471 | pathogenic | -0.921 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/I | 0.0957 | likely_benign | 0.0907 | benign | -0.589 | Destabilizing | 0.997 | D | 0.549 | neutral | N | 0.45835585 | None | None | N |
V/K | 0.7217 | likely_pathogenic | 0.6614 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
V/L | 0.3385 | likely_benign | 0.3015 | benign | -0.589 | Destabilizing | 0.997 | D | 0.592 | neutral | N | 0.497778243 | None | None | N |
V/M | 0.2282 | likely_benign | 0.2117 | benign | -0.505 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/N | 0.5364 | ambiguous | 0.4751 | ambiguous | -0.916 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
V/P | 0.974 | likely_pathogenic | 0.9663 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
V/Q | 0.5168 | ambiguous | 0.4577 | ambiguous | -1.097 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/R | 0.6689 | likely_pathogenic | 0.6095 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/S | 0.5013 | ambiguous | 0.4459 | ambiguous | -1.413 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
V/T | 0.4058 | ambiguous | 0.3733 | ambiguous | -1.327 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
V/W | 0.9178 | likely_pathogenic | 0.8896 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/Y | 0.7027 | likely_pathogenic | 0.6463 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.