Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30770 | 92533;92534;92535 | chr2:178549318;178549317;178549316 | chr2:179414045;179414044;179414043 |
N2AB | 29129 | 87610;87611;87612 | chr2:178549318;178549317;178549316 | chr2:179414045;179414044;179414043 |
N2A | 28202 | 84829;84830;84831 | chr2:178549318;178549317;178549316 | chr2:179414045;179414044;179414043 |
N2B | 21705 | 65338;65339;65340 | chr2:178549318;178549317;178549316 | chr2:179414045;179414044;179414043 |
Novex-1 | 21830 | 65713;65714;65715 | chr2:178549318;178549317;178549316 | chr2:179414045;179414044;179414043 |
Novex-2 | 21897 | 65914;65915;65916 | chr2:178549318;178549317;178549316 | chr2:179414045;179414044;179414043 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | None | N | 0.301 | 0.063 | 0.331876078066 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1544 | likely_benign | 0.1582 | benign | -0.561 | Destabilizing | 0.011 | N | 0.41 | neutral | None | None | None | None | N |
I/C | 0.3862 | ambiguous | 0.4095 | ambiguous | -0.958 | Destabilizing | 0.667 | D | 0.542 | neutral | None | None | None | None | N |
I/D | 0.5046 | ambiguous | 0.5259 | ambiguous | -0.262 | Destabilizing | 0.104 | N | 0.522 | neutral | None | None | None | None | N |
I/E | 0.5208 | ambiguous | 0.5488 | ambiguous | -0.346 | Destabilizing | 0.104 | N | 0.529 | neutral | None | None | None | None | N |
I/F | 0.115 | likely_benign | 0.1261 | benign | -0.702 | Destabilizing | 0.301 | N | 0.512 | neutral | N | 0.464551103 | None | None | N |
I/G | 0.3045 | likely_benign | 0.3131 | benign | -0.644 | Destabilizing | 0.055 | N | 0.507 | neutral | None | None | None | None | N |
I/H | 0.2968 | likely_benign | 0.3295 | benign | 0.005 | Stabilizing | 0.667 | D | 0.587 | neutral | None | None | None | None | N |
I/K | 0.3854 | ambiguous | 0.407 | ambiguous | -0.468 | Destabilizing | 0.055 | N | 0.525 | neutral | None | None | None | None | N |
I/L | 0.0831 | likely_benign | 0.0895 | benign | -0.452 | Destabilizing | 0.019 | N | 0.29 | neutral | N | 0.427206223 | None | None | N |
I/M | 0.0814 | likely_benign | 0.0904 | benign | -0.755 | Destabilizing | 0.602 | D | 0.527 | neutral | N | 0.446138701 | None | None | N |
I/N | 0.1133 | likely_benign | 0.116 | benign | -0.399 | Destabilizing | 0.042 | N | 0.531 | neutral | N | 0.424779207 | None | None | N |
I/P | 0.295 | likely_benign | 0.3289 | benign | -0.463 | Destabilizing | 0.364 | N | 0.573 | neutral | None | None | None | None | N |
I/Q | 0.3017 | likely_benign | 0.3328 | benign | -0.543 | Destabilizing | 0.22 | N | 0.616 | neutral | None | None | None | None | N |
I/R | 0.3038 | likely_benign | 0.3189 | benign | -0.034 | Destabilizing | 0.22 | N | 0.607 | neutral | None | None | None | None | N |
I/S | 0.1124 | likely_benign | 0.1105 | benign | -0.779 | Destabilizing | None | N | 0.319 | neutral | N | 0.387338326 | None | None | N |
I/T | 0.1172 | likely_benign | 0.1233 | benign | -0.767 | Destabilizing | None | N | 0.301 | neutral | N | 0.426414003 | None | None | N |
I/V | 0.077 | likely_benign | 0.0803 | benign | -0.463 | Destabilizing | 0.019 | N | 0.299 | neutral | N | 0.431881324 | None | None | N |
I/W | 0.6028 | likely_pathogenic | 0.6327 | pathogenic | -0.71 | Destabilizing | 0.958 | D | 0.573 | neutral | None | None | None | None | N |
I/Y | 0.3235 | likely_benign | 0.3232 | benign | -0.509 | Destabilizing | 0.667 | D | 0.587 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.