Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30775 | 92548;92549;92550 | chr2:178549303;178549302;178549301 | chr2:179414030;179414029;179414028 |
N2AB | 29134 | 87625;87626;87627 | chr2:178549303;178549302;178549301 | chr2:179414030;179414029;179414028 |
N2A | 28207 | 84844;84845;84846 | chr2:178549303;178549302;178549301 | chr2:179414030;179414029;179414028 |
N2B | 21710 | 65353;65354;65355 | chr2:178549303;178549302;178549301 | chr2:179414030;179414029;179414028 |
Novex-1 | 21835 | 65728;65729;65730 | chr2:178549303;178549302;178549301 | chr2:179414030;179414029;179414028 |
Novex-2 | 21902 | 65929;65930;65931 | chr2:178549303;178549302;178549301 | chr2:179414030;179414029;179414028 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1410441906 | -1.507 | 0.008 | N | 0.209 | 0.121 | 0.230578612272 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
I/V | rs1410441906 | -1.507 | 0.008 | N | 0.209 | 0.121 | 0.230578612272 | gnomAD-4.0.0 | 3.42082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49712E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7571 | likely_pathogenic | 0.7272 | pathogenic | -1.936 | Destabilizing | 0.633 | D | 0.605 | neutral | None | None | None | None | N |
I/C | 0.8929 | likely_pathogenic | 0.8771 | pathogenic | -1.169 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
I/D | 0.9857 | likely_pathogenic | 0.9784 | pathogenic | -1.539 | Destabilizing | 0.987 | D | 0.812 | deleterious | None | None | None | None | N |
I/E | 0.9723 | likely_pathogenic | 0.9617 | pathogenic | -1.314 | Destabilizing | 0.961 | D | 0.797 | deleterious | None | None | None | None | N |
I/F | 0.497 | ambiguous | 0.4454 | ambiguous | -0.97 | Destabilizing | 0.82 | D | 0.699 | prob.neutral | N | 0.498988785 | None | None | N |
I/G | 0.9501 | likely_pathogenic | 0.9366 | pathogenic | -2.477 | Highly Destabilizing | 0.961 | D | 0.789 | deleterious | None | None | None | None | N |
I/H | 0.9491 | likely_pathogenic | 0.9314 | pathogenic | -1.868 | Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
I/K | 0.9457 | likely_pathogenic | 0.9269 | pathogenic | -1.206 | Destabilizing | 0.961 | D | 0.797 | deleterious | None | None | None | None | N |
I/L | 0.1842 | likely_benign | 0.1785 | benign | -0.394 | Destabilizing | 0.003 | N | 0.243 | neutral | N | 0.464873603 | None | None | N |
I/M | 0.2818 | likely_benign | 0.2654 | benign | -0.432 | Destabilizing | 0.901 | D | 0.719 | prob.delet. | N | 0.492658909 | None | None | N |
I/N | 0.8548 | likely_pathogenic | 0.805 | pathogenic | -1.462 | Destabilizing | 0.983 | D | 0.825 | deleterious | N | 0.471009482 | None | None | N |
I/P | 0.9014 | likely_pathogenic | 0.8815 | pathogenic | -0.885 | Destabilizing | 0.987 | D | 0.815 | deleterious | None | None | None | None | N |
I/Q | 0.9314 | likely_pathogenic | 0.912 | pathogenic | -1.285 | Destabilizing | 0.987 | D | 0.817 | deleterious | None | None | None | None | N |
I/R | 0.9133 | likely_pathogenic | 0.888 | pathogenic | -1.109 | Destabilizing | 0.961 | D | 0.821 | deleterious | None | None | None | None | N |
I/S | 0.84 | likely_pathogenic | 0.8059 | pathogenic | -2.248 | Highly Destabilizing | 0.901 | D | 0.716 | prob.delet. | N | 0.514088915 | None | None | N |
I/T | 0.8483 | likely_pathogenic | 0.8186 | pathogenic | -1.865 | Destabilizing | 0.722 | D | 0.657 | neutral | N | 0.465676656 | None | None | N |
I/V | 0.0936 | likely_benign | 0.0913 | benign | -0.885 | Destabilizing | 0.008 | N | 0.209 | neutral | N | 0.419197242 | None | None | N |
I/W | 0.9741 | likely_pathogenic | 0.9666 | pathogenic | -1.273 | Destabilizing | 0.996 | D | 0.78 | deleterious | None | None | None | None | N |
I/Y | 0.9039 | likely_pathogenic | 0.8738 | pathogenic | -0.937 | Destabilizing | 0.961 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.