Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30777 | 92554;92555;92556 | chr2:178549297;178549296;178549295 | chr2:179414024;179414023;179414022 |
N2AB | 29136 | 87631;87632;87633 | chr2:178549297;178549296;178549295 | chr2:179414024;179414023;179414022 |
N2A | 28209 | 84850;84851;84852 | chr2:178549297;178549296;178549295 | chr2:179414024;179414023;179414022 |
N2B | 21712 | 65359;65360;65361 | chr2:178549297;178549296;178549295 | chr2:179414024;179414023;179414022 |
Novex-1 | 21837 | 65734;65735;65736 | chr2:178549297;178549296;178549295 | chr2:179414024;179414023;179414022 |
Novex-2 | 21904 | 65935;65936;65937 | chr2:178549297;178549296;178549295 | chr2:179414024;179414023;179414022 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.928 | N | 0.687 | 0.397 | 0.338834610459 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.928 | N | 0.559 | 0.306 | 0.306695030598 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5336 | ambiguous | 0.536 | ambiguous | -0.104 | Destabilizing | 0.928 | D | 0.687 | prob.neutral | N | 0.484446373 | None | None | N |
E/C | 0.9747 | likely_pathogenic | 0.976 | pathogenic | -0.227 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
E/D | 0.1813 | likely_benign | 0.175 | benign | -0.366 | Destabilizing | 0.039 | N | 0.198 | neutral | N | 0.407969889 | None | None | N |
E/F | 0.9703 | likely_pathogenic | 0.9721 | pathogenic | 0.292 | Stabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
E/G | 0.4401 | ambiguous | 0.4468 | ambiguous | -0.327 | Destabilizing | 0.978 | D | 0.741 | deleterious | N | 0.505555151 | None | None | N |
E/H | 0.8677 | likely_pathogenic | 0.8779 | pathogenic | 0.747 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/I | 0.9166 | likely_pathogenic | 0.9173 | pathogenic | 0.458 | Stabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | N |
E/K | 0.6616 | likely_pathogenic | 0.6459 | pathogenic | 0.507 | Stabilizing | 0.928 | D | 0.559 | neutral | N | 0.515673357 | None | None | N |
E/L | 0.8995 | likely_pathogenic | 0.8941 | pathogenic | 0.458 | Stabilizing | 0.992 | D | 0.775 | deleterious | None | None | None | None | N |
E/M | 0.8974 | likely_pathogenic | 0.8994 | pathogenic | 0.252 | Stabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
E/N | 0.6243 | likely_pathogenic | 0.6367 | pathogenic | -0.146 | Destabilizing | 0.968 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/P | 0.9621 | likely_pathogenic | 0.9653 | pathogenic | 0.291 | Stabilizing | 0.992 | D | 0.777 | deleterious | None | None | None | None | N |
E/Q | 0.445 | ambiguous | 0.4441 | ambiguous | -0.039 | Destabilizing | 0.989 | D | 0.649 | neutral | N | 0.504707002 | None | None | N |
E/R | 0.7707 | likely_pathogenic | 0.7732 | pathogenic | 0.836 | Stabilizing | 0.992 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/S | 0.529 | ambiguous | 0.552 | ambiguous | -0.248 | Destabilizing | 0.944 | D | 0.609 | neutral | None | None | None | None | N |
E/T | 0.6955 | likely_pathogenic | 0.6983 | pathogenic | -0.039 | Destabilizing | 0.983 | D | 0.767 | deleterious | None | None | None | None | N |
E/V | 0.761 | likely_pathogenic | 0.7625 | pathogenic | 0.291 | Stabilizing | 0.989 | D | 0.762 | deleterious | N | 0.498666464 | None | None | N |
E/W | 0.9907 | likely_pathogenic | 0.9909 | pathogenic | 0.483 | Stabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
E/Y | 0.9389 | likely_pathogenic | 0.9399 | pathogenic | 0.562 | Stabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.