Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3078 | 9457;9458;9459 | chr2:178768087;178768086;178768085 | chr2:179632814;179632813;179632812 |
N2AB | 3078 | 9457;9458;9459 | chr2:178768087;178768086;178768085 | chr2:179632814;179632813;179632812 |
N2A | 3078 | 9457;9458;9459 | chr2:178768087;178768086;178768085 | chr2:179632814;179632813;179632812 |
N2B | 3032 | 9319;9320;9321 | chr2:178768087;178768086;178768085 | chr2:179632814;179632813;179632812 |
Novex-1 | 3032 | 9319;9320;9321 | chr2:178768087;178768086;178768085 | chr2:179632814;179632813;179632812 |
Novex-2 | 3032 | 9319;9320;9321 | chr2:178768087;178768086;178768085 | chr2:179632814;179632813;179632812 |
Novex-3 | 3078 | 9457;9458;9459 | chr2:178768087;178768086;178768085 | chr2:179632814;179632813;179632812 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs370704384 | -1.05 | 0.822 | D | 0.606 | 0.607 | None | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 6.15E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1309287997 | None | 0.971 | D | 0.631 | 0.39 | 0.426670027402 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs1309287997 | None | 0.971 | D | 0.631 | 0.39 | 0.426670027402 | gnomAD-4.0.0 | 2.56117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.7835E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7265 | likely_pathogenic | 0.7373 | pathogenic | -0.864 | Destabilizing | 0.698 | D | 0.574 | neutral | D | 0.645731944 | None | None | N |
E/C | 0.9912 | likely_pathogenic | 0.9922 | pathogenic | -0.637 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/D | 0.7816 | likely_pathogenic | 0.8093 | pathogenic | -1.416 | Destabilizing | 0.014 | N | 0.309 | neutral | D | 0.561392695 | None | None | N |
E/F | 0.9862 | likely_pathogenic | 0.988 | pathogenic | -0.343 | Destabilizing | 0.993 | D | 0.756 | deleterious | None | None | None | None | N |
E/G | 0.9061 | likely_pathogenic | 0.9133 | pathogenic | -1.249 | Destabilizing | 0.822 | D | 0.606 | neutral | D | 0.667401215 | None | None | N |
E/H | 0.9693 | likely_pathogenic | 0.9741 | pathogenic | -0.757 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
E/I | 0.8844 | likely_pathogenic | 0.891 | pathogenic | 0.193 | Stabilizing | 0.978 | D | 0.764 | deleterious | None | None | None | None | N |
E/K | 0.9299 | likely_pathogenic | 0.9317 | pathogenic | -1.093 | Destabilizing | 0.822 | D | 0.538 | neutral | D | 0.547251361 | None | None | N |
E/L | 0.9483 | likely_pathogenic | 0.95 | pathogenic | 0.193 | Stabilizing | 0.978 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/M | 0.9369 | likely_pathogenic | 0.9436 | pathogenic | 0.664 | Stabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/N | 0.946 | likely_pathogenic | 0.9541 | pathogenic | -1.443 | Destabilizing | 0.754 | D | 0.576 | neutral | None | None | None | None | N |
E/P | 0.9986 | likely_pathogenic | 0.9983 | pathogenic | -0.138 | Destabilizing | 0.978 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Q | 0.6444 | likely_pathogenic | 0.6679 | pathogenic | -1.285 | Destabilizing | 0.971 | D | 0.631 | neutral | D | 0.574181807 | None | None | N |
E/R | 0.9519 | likely_pathogenic | 0.9497 | pathogenic | -0.807 | Destabilizing | 0.978 | D | 0.632 | neutral | None | None | None | None | N |
E/S | 0.7404 | likely_pathogenic | 0.7611 | pathogenic | -1.803 | Destabilizing | 0.193 | N | 0.407 | neutral | None | None | None | None | N |
E/T | 0.7421 | likely_pathogenic | 0.7708 | pathogenic | -1.494 | Destabilizing | 0.754 | D | 0.621 | neutral | None | None | None | None | N |
E/V | 0.7464 | likely_pathogenic | 0.7558 | pathogenic | -0.138 | Destabilizing | 0.971 | D | 0.701 | prob.neutral | D | 0.587684786 | None | None | N |
E/W | 0.9969 | likely_pathogenic | 0.9973 | pathogenic | -0.192 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/Y | 0.9834 | likely_pathogenic | 0.9856 | pathogenic | -0.143 | Destabilizing | 0.993 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.